Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  109 bits (272), Expect = 1e-28
 Identities = 76/296 (25%), Positives = 135/296 (45%), Gaps = 5/296 (1%)

Query: 20  MDYIHLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDG 79
           M  + L    L  L  L+ +L+ RSVT+ A RL +S  ++S+ LA+LR L +D L     
Sbjct: 1   MREVDLRHADLNLLVVLNALLDERSVTRAAMRLGMSQPAVSRALARLRALFSDALLVDGP 60

Query: 80  NQLIPTPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAI 139
              + T   + + P + + L+ ++ LL    FDP    G  RL M +    + AP++ A 
Sbjct: 61  GGYLLTSRAEDLRPLLRNTLAGVSELLDGRTFDPMQATGSVRLLMLDLEAAVLAPRLIAS 120

Query: 140 LAACSSELSMTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCL 199
           LA  +  + + +        EAL++  +D ++    +   P   +    + +  D  V L
Sbjct: 121 LAVQAPAVDLQVVPPGLRPLEALEADAVDALI--GVVEDAPAGVKK---RKLYQDNFVTL 175

Query: 200 MSADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAI 259
           M A+HP A  +L+++ +L   H+ +        + ++ L +    RR+ V  P F AA  
Sbjct: 176 MRAEHPTAARKLTLERFLELDHVVVSITGTGRAWVDEILARSGRKRRVKVRVPSFFAAVE 235

Query: 260 LCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
           +  ++ L++T     A  A   +  V  + P + G V  SL W+    +     WL
Sbjct: 236 IAARSDLVMTLPSSLARTAADMRRFVMASPPLDLGSVVISLAWHARHQDAPRHVWL 291