Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 7/227 (3%)

Query: 30  LKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIPTPYVQ 89
           L  L AL  ++  R +T  A R+ +S  ++S  +A+LR    D+LF   G +LIPTP  +
Sbjct: 8   LNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPRAE 67

Query: 90  QMGPTVHHVLSSMN-GLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAACSSELS 148
            + P V   L  +   ++     +P      +R+ + +    +F  +V   LA  +  +S
Sbjct: 68  ALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREAPGVS 127

Query: 149 MTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMSADHPLAH 208
             +   +   +E L+ G +D ++LP D+       +  ++    ++ LVC+    +    
Sbjct: 128 FELLPLDDDPYELLRRGDVDFLVLP-DLFMSSAHPKAKLF----AEALVCVGCPTNEQLL 182

Query: 209 AELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHE-TRRIAVATPDF 254
            ELS + Y++  H+        +P FE++L  +H   RR+ +  P F
Sbjct: 183 GELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGF 229