Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., hypothetical transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 11/208 (5%)

Query: 25  LSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIP 84
           L    L  L  L ++L  +SVT  AARL +S S++SK L +LRE+ +D LF R    L P
Sbjct: 2   LKHLDLNLLPVLEILLEEQSVTAAAARLHLSQSAVSKQLTRLREVFDDPLFERTAYGLKP 61

Query: 85  TPYVQQMGPTVHHVLSSMNGLLHCTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAACS 144
           TP    + P +   L  +        F+P   Q  +R+ + E+T+ L  P     L   +
Sbjct: 62  TPKALSLAPDLRQCLQQLAQFTRPDSFEPALSQRQFRMHLVETTYSLTFPYFMPSLLVQA 121

Query: 145 SELSMTIHSKEHYGFEALQSGLIDCIL--------LPHDISQPPTFAQDLVWQVIESDEL 196
             +S+   +      + L    ID  +         P  ++  P    DL +  +  D  
Sbjct: 122 PWVSLNCQTWRLDTMDRLLRCDIDLAIGCREWDERSPMHVNHIP---DDLHYVELVQDYT 178

Query: 197 VCLMSADHPLAHAELSVDAYLAYKHIGI 224
           VCLM  DHP    E  +D +L+Y+ + +
Sbjct: 179 VCLMRRDHPALAQEWDLDTFLSYRQLQV 206