Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chaperonin GroEL from Synechococcus elongatus PCC 7942

 Score =  556 bits (1432), Expect = e-163
 Identities = 289/529 (54%), Positives = 398/529 (75%), Gaps = 11/529 (2%)

Query: 3   AKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEIEL 62
           AK ++++ +AR+ +  G+++LA AV VTLGPKGR+VVL K +GAP I  DGV++AKEIEL
Sbjct: 2   AKRIIYNENARRALEKGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIEL 61

Query: 63  ADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGIDK 122
            D  EN G  +++Q ASK ND AGDGTTTATVLA A++ EG++ VAAG N + LKRGIDK
Sbjct: 62  EDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDK 121

Query: 123 AVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEGQA 182
           A +  VE++   A+P  D++SI QVGAISA +D  +G++IA AM+KVG+ GVI++EEG++
Sbjct: 122 ATNFLVEQIKSHARPVEDSKSIAQVGAISAGNDFEVGQMIADAMDKVGKEGVISLEEGKS 181

Query: 183 LQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESVAK 242
           +  EL V EGM+FD+GY+SPYF    +      + P++L+ DKKI  +++L+P+LE VA+
Sbjct: 182 MTTELEVTEGMRFDKGYISPYFATDTERMEAVFDEPFILITDKKIGLVQDLVPVLEQVAR 241

Query: 243 ASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRVIS 302
           A R L+IIAED++ +ALATLVVN +RG++ VAAVKAPGFG++RKAMLEDIA LT G++I+
Sbjct: 242 AGRPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAVLTGGQLIT 301

Query: 303 EEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQYDR 362
           E+ GL+L+   LD LG A+++TI KDNTTIV    E +A++ R+ QI+ Q+E T S YD+
Sbjct: 302 EDAGLKLDTTKLDQLGKARRITITKDNTTIVAEGNE-AAVKARVDQIRRQIEETESSYDK 360

Query: 363 DKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLKI 422
           +KLQ+R+AKLSGGVAV+K+GAATE EMK++K R++DA++AT+AAVEEGIV GGG  L  +
Sbjct: 361 EKLQERLAKLSGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL 420

Query: 423 ANEL-----SNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYG 477
           A +L     +NL G   ++  G +I  RA+  PL++IA NAG   +VI+ +VK      G
Sbjct: 421 APQLEEWATANLSG---EELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEG 477

Query: 478 YNAATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDK 526
           Y+A+  QF NM   GI+DPAKVTRSALQ AASIA +++TTE +V  VDK
Sbjct: 478 YDASNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECIV--VDK 524