Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  674 bits (1738), Expect = 0.0
 Identities = 346/531 (65%), Positives = 433/531 (81%), Gaps = 1/531 (0%)

Query: 1   MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI 60
           MAAK V FSTDAR ++L GV++LANAVKVTLGPKGR+VVL+KSYGAP ITKDGVSVAKEI
Sbjct: 1   MAAKDVKFSTDARDRLLRGVDILANAVKVTLGPKGRNVVLDKSYGAPRITKDGVSVAKEI 60

Query: 61  ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI 120
           EL DKFENMGAQM+K+VASK+ D AGDGTTTATVLAQA++ EG+K+VAAGMNPMDLKRGI
Sbjct: 61  ELKDKFENMGAQMVKEVASKSADVAGDGTTTATVLAQAIVREGVKSVAAGMNPMDLKRGI 120

Query: 121 DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG 180
           D AV A VE + + +K    +  + QVG ISAN D  +G+IIA AMEKVG  GVITVEE 
Sbjct: 121 DLAVLAVVEDVKKRSKKIKTSAEVAQVGTISANGDEEVGKIIATAMEKVGNEGVITVEEA 180

Query: 181 QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV 240
           + L  EL VVEGMQFDRGYLSPYF+   +    +LENPY+LL +KK+S ++ LLP+LE+V
Sbjct: 181 KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILLHEKKLSGLQALLPVLEAV 240

Query: 241 AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV 300
            ++SR LLIIAEDV+G+ALATLVVN +RG +KVAAVKAPGFG++RKAMLEDIA LT G+V
Sbjct: 241 VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV 300

Query: 301 ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY 360
           ISE++G++LE VT+D LG+AKKVTI K+ TT+VDGA +   ++ R +QI+  +E T+S Y
Sbjct: 301 ISEDLGIKLENVTIDMLGTAKKVTITKEETTLVDGAGDKKDIEARCSQIRANIEDTSSDY 360

Query: 361 DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL 420
           DR+KLQ+R+AKL+GGVAVIK+G ATE E+KEKKDRVDDA+HATRAAVEEG+VAGGGVALL
Sbjct: 361 DREKLQERLAKLAGGVAVIKVGGATETEVKEKKDRVDDAMHATRAAVEEGVVAGGGVALL 420

Query: 421 KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQ-VKTGDEHYGYN 479
                L +++G N DQNVGI I  RA++ P+RQIA NAG + +V+A + ++  D  +GYN
Sbjct: 421 HAIRSLDSVKGANPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYN 480

Query: 480 AATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA 530
           A TG + N++  G++DP KV R+ALQ AASIAGL+ITTEAMV+E+ ++  A
Sbjct: 481 AQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDA 531