Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  662 bits (1707), Expect = 0.0
 Identities = 342/531 (64%), Positives = 430/531 (80%), Gaps = 1/531 (0%)

Query: 1   MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI 60
           MAAK V FS+DAR ++L GV+ LANAVKVTLGPKGR+VV++KS+GAP ITKDGVSVAKEI
Sbjct: 1   MAAKDVKFSSDARDRLLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI 60

Query: 61  ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI 120
           EL DKFENMGAQML++VASK+ D AGDGTTTATVLAQA++ EG KAVAAGMNPMDLKRGI
Sbjct: 61  ELKDKFENMGAQMLREVASKSADVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI 120

Query: 121 DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG 180
           D AV+A V+ +   ++  +    I QVG ISAN D  +G+IIA+AM+KVG  GVITVEE 
Sbjct: 121 DLAVAAVVKDVKTRSRKIATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEA 180

Query: 181 QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV 240
           + L  EL VVEGMQFDRGYLSPYF+   +    +LENPY+L+ +KK+S ++ LLP+LE+V
Sbjct: 181 KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSGLQPLLPVLEAV 240

Query: 241 AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV 300
            ++ R LLIIAEDV+G+ALATLVVN +RG +KVA+VKAPGFG++RKAMLEDIA LT G+V
Sbjct: 241 VQSGRPLLIIAEDVEGEALATLVVNRLRGGLKVASVKAPGFGDRRKAMLEDIAILTGGQV 300

Query: 301 ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY 360
           ISE++G++LE VTLD LG+AK VTI KDNTTIVDGA   + +  R AQI+  +E TTS Y
Sbjct: 301 ISEDLGIKLETVTLDMLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTSDY 360

Query: 361 DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL 420
           DR+KLQ+R+AKLSGGVAVI++G A+EVE+KEKKDRVDDA+HATRAAVEEGI+AGGGVALL
Sbjct: 361 DREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALL 420

Query: 421 KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQ-VKTGDEHYGYN 479
             A  L  L   N DQ VGI I  RA++ P+RQIA NAG + +V+A + +++ D  +GYN
Sbjct: 421 HAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYN 480

Query: 480 AATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA 530
           A TG + N++++G++DP KV R+ALQ AAS+A L+ITTEAMV+E+ ++  A
Sbjct: 481 AQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPA 531