Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., chaperonin GroEL (RefSeq) from Shewanella loihica PV-4

 Score =  778 bits (2009), Expect = 0.0
 Identities = 399/530 (75%), Positives = 466/530 (87%)

Query: 1   MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI 60
           MAAK VLF  DAR KML+GVN+LANAVKVTLGPKGR+VVL+KS+GAP ITKDGVSVAKEI
Sbjct: 1   MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI 60

Query: 61  ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI 120
           EL DKFENMGAQM+K+VASKAND AGDGTTTATVLAQA++ EG+KAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG 180
           DKAV AAV +L  L++ CSDT++I QVG ISANSD +IGEIIA AMEKVG+ GVITVEEG
Sbjct: 121 DKAVVAAVAELKTLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEG 180

Query: 181 QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV 240
           QAL+NEL VVEGMQFDRGYLSPYFIN+P+ G VELENPY+LLVDKKIS+IRELLPILE +
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKISNIRELLPILEGL 240

Query: 241 AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV 300
           AK  + L+IIAEDV+G+ALATLVVN+MRGI+KVAAVKAPGFG++RKAML+DIA LT G V
Sbjct: 241 AKTGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV 300

Query: 301 ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY 360
           I+EEIGLELEK TL+DLG+AK+V I KD+TTI+DG  E   +  R+AQI+ Q E +TS Y
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGEQEQISARVAQIKIQAEESTSDY 360

Query: 361 DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL 420
           DR+KLQ+R+AKL+GGVAVIK+GAATEVEMKEKK RV+DALHATRAAVEEG+VAGGGVAL+
Sbjct: 361 DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI 420

Query: 421 KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNA 480
           ++A+++  L   N+DQ  G+ IALRAME PLRQIA NAG+EASV+AN VK G  +YGYNA
Sbjct: 421 RVASKIGELDVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA 480

Query: 481 ATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA 530
            +  +G+MLEMGILDP KVTRSALQFA+SIAGLMITTEAMV +V +E+ A
Sbjct: 481 GSDVYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGDVPQEAGA 530