Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

 Score =  114 bits (285), Expect = 9e-30
 Identities = 123/542 (22%), Positives = 234/542 (43%), Gaps = 73/542 (13%)

Query: 11  DARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEIELADKFENMG 70
           DA++  +    ++A  V+ TLGPKG   +L    G   +T DGV++ +E+ +    E+  
Sbjct: 19  DAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHPA 74

Query: 71  AQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGIDKAVSAAVEK 130
           A+ML +VA     E GDGTTTA V+A  L+ +  + +   ++P  + +G   A   A E 
Sbjct: 75  AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134

Query: 131 LHQLA--KPCSDTQSITQVGAISANSDHA------IGEIIAQAME-------KVGRNGVI 175
           L  +A      D + +T++   S     A      + EII +A+        KV ++ + 
Sbjct: 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194

Query: 176 TVEEGQALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKIS---HIRE 232
             ++  A  ++  +++G+  D+  +S     +     + L N  + + + +      I +
Sbjct: 195 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITD 254

Query: 233 LLPILESVAKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFG-----EQRKA 287
              ++E + +  + L  +  ++   A    V+   +GI  +A       G       +K+
Sbjct: 255 PAKLMEFIEQEEKMLKDMVAEI--KASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKS 312

Query: 288 MLEDIAALTAGRVISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIA 347
            +E +A  T   VI+     +L    L D G  ++  I+ D+   V+    P A+     
Sbjct: 313 DMEKLAKATGANVITNI--KDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAV----- 365

Query: 348 QIQHQLEHTTSQYDRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAV 407
                                          + I   TE  ++E    VDDA+      +
Sbjct: 366 ------------------------------TMLIRGTTEHVIEEVARAVDDAVGVVGCTI 395

Query: 408 EEG-IVAGGGVALLKIANELSN-LQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEA--- 462
           E+G IV+GGG   ++++ +L    +G +  + + +R    A+E   R +A NAG +A   
Sbjct: 396 EDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEI 455

Query: 463 --SVIANQVKTGDEHYGYNAATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAM 520
              V A     G++  G N  TG   +M E G+++P +V   A+Q AA    +++  + +
Sbjct: 456 LVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDV 515

Query: 521 VS 522
           ++
Sbjct: 516 IA 517