Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis JJ

 Score =  115 bits (289), Expect = 3e-30
 Identities = 125/545 (22%), Positives = 237/545 (43%), Gaps = 79/545 (14%)

Query: 11  DARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEIELADKFENMG 70
           DA++  +    ++A  V+ TLGPKG   +L    G   +T DGV++ +E+ +    E+  
Sbjct: 19  DAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHPA 74

Query: 71  AQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGIDKAVSAAVEK 130
           A+ML +VA     E GDGTTTA V+A  L+ +  + +   ++P  + +G   A   A E 
Sbjct: 75  AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134

Query: 131 LHQLA--KPCSDTQSITQVGAISANSDHA------IGEIIAQAME-------KVGRNGVI 175
           L  +A      D + +T++   S     A      + EII +A+        KV ++ + 
Sbjct: 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194

Query: 176 TVEEGQALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKIS---HIRE 232
             ++  A  ++  +++G+  D+  +S     +     + L N  + + + +      I +
Sbjct: 195 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITD 254

Query: 233 LLPILESVAKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFG-----EQRKA 287
              ++E + +  + L  +  ++   A    V+   +GI  +A       G       +K+
Sbjct: 255 PAKLMEFIEQEEKMLKDMVAEI--KASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKS 312

Query: 288 MLEDIAALTAGRVISEEIGLELEKVTLDDLGSAKKV---TINKDNTTIVDGAAEPSALQD 344
            +E +A  T   VI+      ++ ++ DDLG A  V    I+ D+   V+    P A+  
Sbjct: 313 DMEKLAKATGANVIT-----NIKDLSADDLGEAGLVEERKISGDSMIFVEECKHPKAV-- 365

Query: 345 RIAQIQHQLEHTTSQYDRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATR 404
                                             + I   TE  ++E    VDDA+    
Sbjct: 366 ---------------------------------TMLIRGTTEHVIEEVARAVDDAVGVVG 392

Query: 405 AAVEEG-IVAGGGVALLKIANELSN-LQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEA 462
             +E+G IV+GGG   ++++ +L    +G +  + + +R    A+E   R +A NAG +A
Sbjct: 393 CTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDA 452

Query: 463 -----SVIANQVKTGDEHYGYNAATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITT 517
                 V A     G++  G N  TG   +M E G+++P +V   A+Q AA    +++  
Sbjct: 453 IEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512

Query: 518 EAMVS 522
           + +++
Sbjct: 513 DDVIA 517