Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., chaperonin GroEL (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  769 bits (1985), Expect = 0.0
 Identities = 389/529 (73%), Positives = 469/529 (88%)

Query: 1   MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI 60
           MAAK V+F  DAR KML+GVN+LANAVKVTLGPKGR+VVL+KS+G+P ITKDGVSVAKEI
Sbjct: 1   MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI 60

Query: 61  ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI 120
           EL DKFENMGAQM+K+VASKAND AGDGTTTATVLAQA++ EG+KAVAAGMNPMDLKRGI
Sbjct: 61  ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI 120

Query: 121 DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG 180
           DKAV AAV +L  L++ C+D+++I QVG ISANSD +IG+IIA AMEKVG+ GVITVEEG
Sbjct: 121 DKAVIAAVAELKNLSQDCADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG 180

Query: 181 QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV 240
           QAL+NEL VVEGMQFDRGYLSPYFIN+P+ G VEL++P+VLLVDKKIS+IRELLPILE +
Sbjct: 181 QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL 240

Query: 241 AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV 300
           AK  + LLI+AEDV+G+ALATLVVN+MRGI+KVAAVKAPGFG++RKAML+D+A LT G V
Sbjct: 241 AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV 300

Query: 301 ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY 360
           I+EEIGLELEK TL+DLG+AK+V I KDNTTI+DG  E + ++ R++QI+ Q+E +TS Y
Sbjct: 301 IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDY 360

Query: 361 DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL 420
           D++KLQ+R+AKL+GGVAVIK+GAATEVEMKEKK RV+DALHATRAAVEEG+V GGGVAL+
Sbjct: 361 DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI 420

Query: 421 KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNA 480
           ++A+++++++  N+DQ  G+ IALRAME PLRQIA NAG+EASV+AN VK G  +YGYNA
Sbjct: 421 RVASKIADVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA 480

Query: 481 ATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESA 529
               +G+MLEMGILDP KVTRSALQFAASIAGLMITTEAMV+E+ K  A
Sbjct: 481 GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAELPKADA 529