Pairwise Alignments

Query, 530 a.a., molecular chaperone GroEL from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., 60 kDa chaperonin (groEL) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  594 bits (1532), Expect = e-174
 Identities = 302/522 (57%), Positives = 395/522 (75%), Gaps = 1/522 (0%)

Query: 3   AKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEIEL 62
           AK +LF+ DAR ++  GV+ LANAVKVTLGPKGR+V++ K +GAP ITKDGV+VAKEIEL
Sbjct: 2   AKEILFNIDARDQLKKGVDALANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEIEL 61

Query: 63  ADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGIDK 122
           AD ++N GAQ++K+VASK  D+AGDGTTTATVLAQA++ EG+K V AG +PMD+KRGIDK
Sbjct: 62  ADAYQNTGAQLVKEVASKTGDDAGDGTTTATVLAQAIVAEGLKNVTAGASPMDIKRGIDK 121

Query: 123 AVSAAVEKLHQLAKPCSDT-QSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEGQ 181
           AV+  VE +   A+   D    I QV  +SAN+D  IG++IA AM KV ++GVIT+EE +
Sbjct: 122 AVAKVVESIKAQAETVGDNYDKIEQVATVSANNDPVIGKLIADAMRKVSKDGVITIEEAK 181

Query: 182 ALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESVA 241
                + VVEGMQFDRGYLS YF+   +    E+E PY+L+ DKKIS++++ LPILE   
Sbjct: 182 GTDTTIGVVEGMQFDRGYLSAYFVTNTEKMECEMEKPYILIYDKKISNLKDFLPILEPAV 241

Query: 242 KASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRVI 301
           +  R LL+IAEDVD +AL TLVVN +R  +K+ AVKAPGFG++RK MLEDIA LT G VI
Sbjct: 242 QTGRPLLVIAEDVDSEALTTLVVNRLRSQLKICAVKAPGFGDRRKEMLEDIAILTGGVVI 301

Query: 302 SEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQYD 361
           SEE GL+LE+ T++ LG+A KVT++KD TTIV+GA     +++R  QI+ Q+  T S YD
Sbjct: 302 SEEKGLKLEQATIEMLGTADKVTVSKDYTTIVNGAGVKENIKERCDQIKAQIVATKSDYD 361

Query: 362 RDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLK 421
           R+KLQ+R+AKLSGGVAV+ +GAA+EVEMKEKKDRVDDAL ATRAA+EEGI+ GGGVA ++
Sbjct: 362 REKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIIPGGGVAYIR 421

Query: 422 IANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNAA 481
             + L  ++GDN D+  GI I  RA+EEPLR+I  NAG E +V+  +V+ G   +GYNA 
Sbjct: 422 AIDSLEGMKGDNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVREGKGDFGYNAR 481

Query: 482 TGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSE 523
           T  + N+   G++DPAKV R AL+ AASIAG+ +TTE ++ E
Sbjct: 482 TDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVE 523