Pairwise Alignments

Query, 654 a.a., arginine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., diaminopimelate decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.9 bits (159), Expect = 4e-15
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 31/278 (11%)

Query: 98  AFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELEHKQLGLEAGSKPELLAVLA 157
           AFN A+  + +    L+ Y +K N    V++ +LA          G +  S  EL  V+ 
Sbjct: 43  AFNNAVAGHPH----LVCYAVKANSNLAVLN-VLARLGS------GFDIVSGGELARVIE 91

Query: 158 MAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKPRLG 217
                + V+     K    +  AL    LG   F V E  +EL+ +   A  LG    + 
Sbjct: 92  AGGDPAKVVFSGVGKTVAEMEQAL---NLGIYCFNV-ESSAELEQLNLVAGRLGKVAPVS 147

Query: 218 LRIRL-ASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAENQLEALQLVHFHLGSQMAN 276
           LR+      G   + S+G +++KFG+A  +   V  R  A   L+ ++ V  H+GSQ+  
Sbjct: 148 LRVNPDVDAGTHPYISTGLKENKFGIAMDEAEAVFARAHALPHLQ-VKGVDCHIGSQLTE 206

Query: 277 IRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDGTRSQSSNSMNYGLHEYARNI 336
           I+   + ++  +     L E G  I+ FDVGGGL V YD       +        YA  +
Sbjct: 207 IQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPD-------VYAAAL 259

Query: 337 VSTVSDVCNLYGQPRPVIISESGRSITAHHAVLITNVI 374
           +  +       G  +  +I E GR+I A+  + +T V+
Sbjct: 260 LKRL-------GHRKLKLIFEPGRAIAANAGIFVTEVL 290