Pairwise Alignments

Query, 654 a.a., arginine decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., decarboxylase, pyridoxal-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 65/284 (22%), Positives = 115/284 (40%), Gaps = 42/284 (14%)

Query: 95  ICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELEHKQLGLEAGSKPELLA 154
           I   ++  +  + Y + Y   Y +K N   E++         L+ K    +  S  EL  
Sbjct: 40  IAKQYDDMVNSFPYADVY---YAVKANPAAEIL-------TLLKDKGSNFDIASIYELDM 89

Query: 155 VLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLSELDLVLKEAKSLGVKP 214
           V+ +   A  V   N  K R+ +R      + G +++   +  ++L ++ +EA       
Sbjct: 90  VMNVGVTADRVSYGNTIKKRQDVRAFY---ERGVRMY-ASDSEADLRMIAEEAPG----S 141

Query: 215 RLGLRIRLASQGAGKWQSSGGEKSKFGLA---ASQVLTVINRLKAENQLEALQLVHFHLG 271
           R+ +RI         W  S     KFG     A ++L + N L  E        + FH+G
Sbjct: 142 RIYVRILTEGTDTADWPLS----RKFGCQNEMAYELLVLANELGLEPYG-----ISFHVG 192

Query: 272 SQMANIRDVRNGVNEAVRFYCELR-ELGAHIDFFDVGGGLAVDYDGTRSQSSNSMNYGLH 330
           SQ  +I    + + +    +  LR E    +   ++GGG   +Y    +Q        L 
Sbjct: 193 SQQRDIGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQ--------LG 244

Query: 331 EYARNIVSTVSDVCNLYGQPRPVIISESGRSITAHHAVLITNVI 374
            YA  I   + +    +G   P II E GRS+ ++  VL++ V+
Sbjct: 245 VYAEQITHFLKED---FGDDLPQIILEPGRSLISNAGVLVSEVV 285