Pairwise Alignments

Query, 516 a.a., cryptochrome/photolyase family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Deoxyribodipyrimidine photolyase-related protein from Pseudomonas syringae pv. syringae B728a

 Score =  376 bits (966), Expect = e-109
 Identities = 209/514 (40%), Positives = 293/514 (57%), Gaps = 16/514 (3%)

Query: 6   VRLILGDQLNH---AHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFADY 62
           + LILGDQL+    + +     RD VL  + E+ +E  +V HH QK    F+AM+ FA+ 
Sbjct: 14  LHLILGDQLSFDLASLAGLIPERDTVL--MVEVMEEASHVPHHPQKIVLIFSAMRHFAEA 71

Query: 63  LSAEGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLSGI 122
           L   G  V ++ LD       +P  + +    ++A+        ++RL + + +    G+
Sbjct: 72  LRERGVRVQYVMLDDPQNTGSVPGELQRWQALLRAEELHITECGDWRLEQSIKDC---GL 128

Query: 123 TIGCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFDAD 182
            I       FL    E        K + ME FYR MR++   L+  DG P GG WNFDA+
Sbjct: 129 PIQWHADTRFLCSRDEFSSWAHGKKQLRMEFFYREMRRKSRLLLNGDGTPVGGAWNFDAE 188

Query: 183 NRNKLKSPDLLQLPTPLCFD-NPVASIKARIERHRIPSIGQVGESLLWPINRAQALSLLA 241
           NR  L  P  +  P PL F  + +     ++   R  S     ++  +P+  A A +L  
Sbjct: 189 NRKAL--PKGVAAPYPLRFSADTITRQVLKLVGERFASHYGSLDNFDYPVTHADAQALWE 246

Query: 242 HFCQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQGQ 301
           +F    L  FG +QDAM    P    L+H+R+S ALN  LL  R+V     SAY A  G+
Sbjct: 247 YFLDYGLAGFGDYQDAMATDEPF---LFHARISAALNIGLLDLRQVCSDVESAYWA--GR 301

Query: 302 ISLAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQA 361
           + L   EGF+RQ++GWREYVRG+YW  MP Y + N  G  RPLP ++W G+T+M C+ QA
Sbjct: 302 VGLNAAEGFIRQLIGWREYVRGVYWLKMPDYASGNLFGNSRPLPEFYWTGETQMNCMSQA 361

Query: 362 ITQSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALFA 421
           I QSL   YAHHIQRLMVTGNFALL    P+Q+  WYL IY+DA +WVELPNT GM + A
Sbjct: 362 IGQSLKHAYAHHIQRLMVTGNFALLAGIVPEQICEWYLAIYMDAFDWVELPNTLGMVMHA 421

Query: 422 DGGLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLANN 481
           DGG + +KPY ASG YI +MSDYC  CAY+V   + E ACP N+LYW F+++H D L  N
Sbjct: 422 DGGYLGSKPYCASGQYIKRMSDYCRGCAYKVTESTTEDACPFNALYWHFLMRHGDLLRRN 481

Query: 482 PRIGMLYKTWDKMTSDSQQAILSTADAYLSQIES 515
            R+ ++YK  D+M    QQA+ +  +  L+++++
Sbjct: 482 QRMAIIYKNLDRMAEPKQQALWARGEHLLARLDA 515