Pairwise Alignments

Query, 516 a.a., cryptochrome/photolyase family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., Uncharacterized protein related to deoxyribodipyrimidine photolyase from Phaeobacter inhibens DSM 17395

 Score =  400 bits (1027), Expect = e-116
 Identities = 220/509 (43%), Positives = 301/509 (59%), Gaps = 13/509 (2%)

Query: 8   LILGDQLNH--AHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFADYLSA 65
           LILGDQL+H        + + D L L+AE+ +E  YV HH +K     +AM+ FAD L+A
Sbjct: 18  LILGDQLSHDLPSLQVGDPQKDRL-LMAEVAEEASYVPHHKKKLAFVLSAMRHFADELTA 76

Query: 66  EGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLSG-ITI 124
            G  + ++ LD       L   + +  +Q          P EYRL E +   R SG   +
Sbjct: 77  AGWDLKYVHLDDPDNSGSLTGELDRALEQFTVTEVLVTEPGEYRLKEALN--RWSGPARL 134

Query: 125 GCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFDADNR 184
             +D   FL             K + ME+FYR MR++ G LM  D  PEGG+WN+D +NR
Sbjct: 135 TMLDDSRFLASHDMFRSWAEGRKQLRMEYFYRDMRRKTGLLMQGDS-PEGGKWNYDTENR 193

Query: 185 NKLKSPDLLQLPTPLCFDNPVASIKARIERHRIPSIGQVGESLLWPINRAQALSLLAHFC 244
              ++   +  P     D     +   +E+    + G++     + + RA AL  L HF 
Sbjct: 194 KPAQNDMFMPKPMRCDPDRITQDVLELVEQRFPGNFGRL-TPFWFAVTRAAALKALDHFI 252

Query: 245 QICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQGQISL 304
            + LP FG +QDAM    P    LYHS LS  +N  LL+P EV  +   AY   +G   L
Sbjct: 253 DVALPLFGDYQDAMLDGEPF---LYHSLLSQYINIGLLNPLEVCRSAERAYY--EGHAPL 307

Query: 305 AQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQAITQ 364
             VEGF+RQI+GWREY+RG+YW  MP Y   N LGA+R LP ++W+G+T M C+  AITQ
Sbjct: 308 NAVEGFIRQIIGWREYMRGIYWLKMPGYTRENALGAKRDLPDFYWSGETGMACMAAAITQ 367

Query: 365 SLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALFADGG 424
           + D  YAHHIQRLMVTGNFA+L   +P QV  WYL +Y DA EWVE PN  GM+ FADGG
Sbjct: 368 TRDEAYAHHIQRLMVTGNFAMLAGINPHQVHEWYLAVYADAYEWVEAPNVIGMSQFADGG 427

Query: 425 LIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLANNPRI 484
           L+ +KPY+ASG+YINKMS+YC +CAY VK K+G KACP N LYW F++++R++L+ NPR+
Sbjct: 428 LLGSKPYAASGNYINKMSNYCTTCAYDVKQKTGPKACPFNPLYWDFLIRNREKLSKNPRL 487

Query: 485 GMLYKTWDKMTSDSQQAILSTADAYLSQI 513
              Y+TWD+M+++ QQ  L +A+  L  +
Sbjct: 488 MQPYRTWDRMSAEKQQEYLISAEKVLDSL 516