Pairwise Alignments

Query, 516 a.a., cryptochrome/photolyase family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., deoxyribodipyrimidine photolyase-related protein (RefSeq) from Shewanella sp. ANA-3

 Score =  680 bits (1754), Expect = 0.0
 Identities = 327/514 (63%), Positives = 390/514 (75%), Gaps = 2/514 (0%)

Query: 3   YSVVRLILGDQLNHAHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFADY 62
           +  VRLILGDQLN  H+W+ +    VLYLIAELHQE  YV HH+QK CAFF+AM  FA  
Sbjct: 14  FHTVRLILGDQLNAQHTWYQQVDPKVLYLIAELHQENTYVTHHVQKICAFFSAMAQFASE 73

Query: 63  LSAEGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLSGI 122
           L A GH V +L LD +  + DL  L+     +  A  F+YQRPDEYRLL Q++ L+L+  
Sbjct: 74  LGAAGHRVRYLTLDDTQDFADLNALLQHYVAETGAIKFEYQRPDEYRLLAQLSQLKLANA 133

Query: 123 TIGCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFDAD 182
            + CVDTEHFL PF EI  +FP  +  LMEHFYRRMRKRF  LMT DGKP GGQWNFDA 
Sbjct: 134 VVNCVDTEHFLFPFDEIDREFPQGQHRLMEHFYRRMRKRFNILMT-DGKPVGGQWNFDAS 192

Query: 183 NRNKLKSPDLLQLPTPLCFDNPVASIKARIERHRIPSIGQVGESLLWPINRAQALSLLAH 242
           NR KLKS D+  LPTPL F + V  I  R+ RH I ++G+V   LLWP NRAQ+L LL +
Sbjct: 193 NRQKLKSQDIKSLPTPLMFGHNVQDILERLTRHGINTMGKVDTHLLWPTNRAQSLELLQY 252

Query: 243 FCQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQGQI 302
           FC+ CLP FGRFQDAMT QHP +WSLYHSRLSF+LN+KL+SP EVI A I  Y A    I
Sbjct: 253 FCEYCLPAFGRFQDAMTQQHPAQWSLYHSRLSFSLNAKLISPLEVINAVIEHYHA-NPFI 311

Query: 303 SLAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQAI 362
            +AQVEGFVRQILGWREYVRG+YW+NMP Y + N L A R LP YFW+G+T+M CL +A+
Sbjct: 312 EIAQVEGFVRQILGWREYVRGIYWANMPQYASINALEATRKLPDYFWHGKTRMNCLHRAL 371

Query: 363 TQSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALFAD 422
           + SLD+ YAHHIQRLMV GNF LLTE  PD+VD WYLG+Y+DAIEWVE+PNTRGMALFAD
Sbjct: 372 SPSLDYAYAHHIQRLMVIGNFCLLTEIAPDEVDKWYLGVYVDAIEWVEMPNTRGMALFAD 431

Query: 423 GGLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLANNP 482
           GG++ TKPY+ASGSYINKMSDYC SC Y++K +SG  ACPLNSLYWRFM KHR +L +NP
Sbjct: 432 GGIVGTKPYAASGSYINKMSDYCGSCHYKIKERSGTLACPLNSLYWRFMDKHRAQLIHNP 491

Query: 483 RIGMLYKTWDKMTSDSQQAILSTADAYLSQIESL 516
           RI MLY+TWDK    ++QAIL+TA+ +L+Q+E L
Sbjct: 492 RIAMLYRTWDKTDEAARQAILATAEQHLAQLERL 525