Pairwise Alignments

Query, 278 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 79.7 bits (195), Expect = 8e-20
 Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 41/303 (13%)

Query: 5   ALAAVCALLFSITTMTPFVQASEITISGSTSVARIMDVLAEKYNQQHPETYVAVQGVGST 64
           A+AAV   + S T  T    +  ++  GS ++A +M + AE Y +++P   + +Q  GS+
Sbjct: 22  AVAAVDPAIPSYTKTTGV--SGNLSSVGSDTLANLMTLWAENYKKEYPNVNIQIQAAGSS 79

Query: 65  AGISLLKKGVADIAMTSRYLTESEAQ--NTLHTF-----TLAFDGLAIVVNQANPVTNLT 117
                L +G +++   SR + ++E Q   T + +      +A D LA+ V++ NP+  LT
Sbjct: 80  TAPPALTEGTSNLGPMSRKMKDNELQAFETKYGYKPTAIPVAVDALAVFVHKDNPIKGLT 139

Query: 118 REQLYGIY--------KGQITNWKQVGGN----DQKIAVVTREASSGTRYSFESLMGLTK 165
             Q+  I+        K  +  W  +G      ++ + +  R + SGT Y +     L K
Sbjct: 140 MAQVDAIFSSTRLCGAKADVKTWGDLGVTGDLANKPVQLFGRNSVSGT-YGYFKEEALCK 198

Query: 166 TVKDREVSDVAPTALVVNSNSMMKTLVNHNTQAVGFISIGSVDKSVKAIQFEK------A 219
                 V++   +A VV S       ++ +   VG+  IG    SVK +   K       
Sbjct: 199 GDYKSNVNEQPGSASVVQS-------ISSSLNGVGYSGIGYKTASVKTVALAKKEGGEFI 251

Query: 220 DPTSDNIAKHTYQLSRPFLILHYSDNADEQ----TKEFIAFLKSESAKKLIVEYGYI-MP 274
           + T +N     Y LSR FL ++ +   ++       EF+  + S+  ++++V+ GYI +P
Sbjct: 252 EDTEENALNGKYPLSR-FLYVYVNKAPNKPLAPLEAEFVKLILSKQGQEVVVKDGYIPLP 310

Query: 275 SDV 277
           + V
Sbjct: 311 AKV 313