Pairwise Alignments

Query, 278 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., phosphate ABC transporter, periplasmic binding protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 80/313 (25%), Positives = 135/313 (43%), Gaps = 57/313 (18%)

Query: 1   MIRMALAAVCALLFSITTMTPFVQA-SEITISGSTSVARIMDVLAEKYNQQHPETYVAVQ 59
           MIR  +A      F+   +    +A  +I I GS++V      +AE + +        ++
Sbjct: 1   MIRKTIALAA---FAAVAVAGAAEARDQIRIVGSSTVYPFATTVAENFGKTSSFKTPVIE 57

Query: 60  GVGSTAGISLLKKGVA----DIAMTSRYLTESE----AQNTLHTFT---LAFDGLAIVVN 108
             GS  G+ L   GV     DIA  SR + +SE    A+N +   T   + FDG+ +   
Sbjct: 58  STGSGGGLKLFCAGVGVEHPDIANASRRIKKSEVETCAKNGVKEITEVQIGFDGIVLANT 117

Query: 109 QANPVTNLTREQLYGIYKGQI-----------TNWKQVGGN--DQKIAVVTREASSGTRY 155
           +  P  NLT+ Q++     ++           +NW Q+     +++I V+    +SGTR 
Sbjct: 118 KTAPAFNLTKGQIFQALAKEVPVDGKWVANPYSNWSQIDAKLPNEEIEVLGPPPTSGTRD 177

Query: 156 SFESLMGLT-----------KTVKDREVSDVAPTALV--------VNSNSMMKTLVNHNT 196
           +F  L+  T           K   +++ S V  +            N N +++ L ++ T
Sbjct: 178 AFVELVMETGCLELPACADLKKADEKKFSSVFASLREDGRFIEAGENDNLIVQKLQSNPT 237

Query: 197 QAVGFISIGSVDKSVKAIQ---FEKADPTSDNIAKHTYQLSRPFLILHYSDNADEQT--- 250
            A+G      +D++   IQ    E   PT ++IA   Y++SRP  +  Y  NA   T   
Sbjct: 238 -ALGIFGFSFLDQNSDKIQGSHIEGVAPTFEDIASSKYKVSRP--LFFYVKNAHVGTVPG 294

Query: 251 -KEFIAFLKSESA 262
            KE++A   SE A
Sbjct: 295 IKEYVAEFTSEKA 307