Pairwise Alignments

Query, 278 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., phosphate-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 35/273 (12%)

Query: 32  GSTSVARIMDVLAEKYNQQHPETYVAVQGVGSTAGISLLKKGVADIAMTSRYLTESEAQN 91
           GS ++A +M + AE++ Q +P   + +Q  GS+     L +G +     SR +  +E + 
Sbjct: 47  GSDTLANMMTLWAEEFKQMYPNVNIQIQAAGSSTAPPALTEGTSQFGPMSRKMKPNEVEA 106

Query: 92  TLHTF-------TLAFDGLAIVVNQANPVTNLTREQLYGIYK-------GQITNWKQVG- 136
               +        +A D LA+ V++ NP+  LT EQ+ GI+          I  W  +G 
Sbjct: 107 FEKHYGYKPTEIRVAIDALAVFVHKDNPIKGLTAEQVDGIFSSTHKCGGADIQRWGDLGL 166

Query: 137 ---GNDQKIAVVTREASSGTRYSFESLMGLTKTVKDREVSDVAPTALVVNSNSMMKTLVN 193
               + + + +  R + SGT Y +     L K      V++   +A VV S       V+
Sbjct: 167 SGDWSAKDVQLYGRNSVSGT-YGYFKEKALCKGDFKANVNEQPGSASVVQS-------VS 218

Query: 194 HNTQAVGFISIGSVDKSVKAIQFEK-----ADPTSDNIAKHTYQLSR-PFLILHYSDNAD 247
            +  AVG+  IG     VKA+   K      + T++N A  TY LSR  ++ ++   N D
Sbjct: 219 QSLNAVGYSGIGYKTAGVKAVAIAKKGNEFIEATAENAANGTYPLSRYLYVYVNKQPNKD 278

Query: 248 --EQTKEFIAFLKSESAKKLIVEYGYI-MPSDV 277
                KEFI ++ S+  ++++ + GY+ +P  V
Sbjct: 279 LAPMEKEFIRYVLSKQGQQVVEKDGYVTLPKSV 311