Pairwise Alignments

Query, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., Exoribonuclease II from Synechococcus elongatus PCC 7942

 Score =  142 bits (357), Expect = 7e-38
 Identities = 103/331 (31%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 193 REDLTALPFVTIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYITPEDEMDKVARER 252
           R+DL+ L   TID EST+++DD L  Q+L +G   L + +ADPT  I P D +D  AR R
Sbjct: 264 RQDLSHLKVYTIDDESTREIDDGLSCQRLSDGRLQLWVHVADPTRLIEPGDALDLEARRR 323

Query: 253 GFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGDDIRFFAANIKSH 312
             TIYLP   +PM P +LA    SL++ Q   AL   + + + G I        + I+  
Sbjct: 324 STTIYLPTGMVPMFPLELAAGPMSLVQGQACCALSFGICLDEQGAIA-SYEIVPSQIRPT 382

Query: 313 ARLVYDHVSDWLETGSSEQWQPSEEIAQVVRDLYAFSQARANWRETHAVVFPDRPDYRFE 372
            RL Y+ V + L+ G + +        Q + DL+  +Q R  WR     +  + P+   +
Sbjct: 383 YRLTYEDVDEMLDLGVTAE--------QELLDLWEMAQRRRRWRHQQGAIAINMPEAVIK 434

Query: 373 LSADNDVVAIHADMRRTANRLVEESMITANICAGKTLQTTFGFGVFNTHAGFKAEKMADV 432
           +S  +D ++I       A  LV E MI A   AG    T    G+     G    ++   
Sbjct: 435 VSEADDQISISVLEESAARALVAEMMILAGEVAGHYGATN---GLPLPFRGQPQPELPSE 491

Query: 433 VELMAVNGAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQSYSEIGNQPLPHFA 492
            EL+A+   P              A+RR +   ETS                  P  H +
Sbjct: 492 EELLALPAGPVRS----------CAIRRCMPRSETSL----------------NPQRHAS 525

Query: 493 MGLDVYATWTSPIRKYGDMINHRLLKAHILG 523
           +GLD Y+  TSPIR+Y D++ H  +KAH+ G
Sbjct: 526 LGLDRYSQVTSPIRRYTDLVTHFQIKAHLRG 556