Pairwise Alignments

Query, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., exoribonuclease R from Dechlorosoma suillum PS

 Score = 72.4 bits (176), Expect = 6e-17
 Identities = 84/343 (24%), Positives = 140/343 (40%), Gaps = 74/343 (21%)

Query: 196 LTALPFVTIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYITPEDEMDKVARERGFT 255
           L ++   +ID  +T ++DDA   + LP   + + I IA P     P + +D++AR+R  T
Sbjct: 238 LASVQAFSIDDAATTEIDDAFSLEALPGIGWRVGIHIAAPGLGFGPGEALDQIARDRLST 297

Query: 256 IYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKD-GVIGDDIRF----FAANIK 310
           +Y+PG  I MLP D   E  +L E + RPA+   +T+ +   ++G + R      AAN++
Sbjct: 298 VYMPGNKITMLP-DAVVEAYTLAEGKPRPAVSLYLTVNEGLEIVGHESRLERVHVAANLR 356

Query: 311 SHARLVYDHVSDWLETGSSEQWQPSEEIAQVVRDLYAFSQARANWRETHAV------VFP 364
            H   +    ++         ++ ++E+  + +   A    R     T  +      VFP
Sbjct: 357 HHE--IEPLFNEATLAAGLGDFRFAQELKLLWQLACACEGRRGKPSATQGIFDYNFDVFP 414

Query: 365 DRPDYRFELSADNDVVAIHADMRRT-ANRLVEESMITANICAGKTLQTTFGFGVFNTHAG 423
           D  D     +   D + I A  R +  ++LV E MI AN                 T  G
Sbjct: 415 DASD----PTGAADRIEISARKRGSPLDKLVAELMIVANA----------------TWGG 454

Query: 424 FKAEKMADVVELMAVNGAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQSYSEI 483
             AEK     ++  +  A  A    + T                                
Sbjct: 455 LLAEK-----KVACIYRAQTAGKVRMTT-------------------------------- 477

Query: 484 GNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAP 526
              PLPH  +G+  YA  +SP+R+Y D++N   L   +  +AP
Sbjct: 478 --SPLPHEGLGVPQYAWSSSPLRRYVDLVNQWQLITLLQDRAP 518