Pairwise Alignments

Query, 678 a.a., exoribonuclease 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., exoribonuclease II from Klebsiella michiganensis M5al

 Score =  669 bits (1726), Expect = 0.0
 Identities = 338/650 (52%), Positives = 447/650 (68%), Gaps = 9/650 (1%)

Query: 1   MFQDNPLLAQLKQKIQETLPKKEGTIKASDKGFGFLEVDSKTSYFVPPPYMKKCMHGDKV 60
           MFQDNPLLAQLKQ++    P+ EG +K ++KGFGFLEVDS+ SYF+PPP MKK MHGD++
Sbjct: 1   MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI 60

Query: 61  VAFIRTENEREVAEPSELIEQSLTRFIGRVKLFKGKLNVAPDHPQLKKLSLKAKTKKGLN 120
           +A + TE ERE AEP EL+E  LTRF+G+V     +L++ PDHP LK  ++  +  +G+ 
Sbjct: 61  IAVVNTEKERESAEPEELVEPFLTRFVGKVHKKDDRLSIVPDHPLLKD-AIPCRAARGV- 118

Query: 121 EADFQEGDWVVAHLVRHPLKGDDGFFVQISHKITDANDKIAPWWVTLAENDLPNSEPAGI 180
           E DF+EGDW VA + RHPLKGD GF+ +++  IT  +D   PWWVTLA ++L    P G+
Sbjct: 119 EHDFKEGDWGVAEMRRHPLKGDRGFYAELTQYITYGDDHFVPWWVTLARHNLEKEAPDGV 178

Query: 181 DDWQLKDDADLVREDLTALPFVTIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYIT 240
               L  D  L R DLT L FVTID  ST+DMDDALY +Q  +G   LT+AIADPTA+I 
Sbjct: 179 ATEML--DEGLERRDLTELAFVTIDSASTEDMDDALYVEQNADGKLHLTVAIADPTAWIA 236

Query: 241 PEDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLMENQVRPALCCSVTIRKDGVIGD 300
              ++D  A+ R FT YLPG NIPMLPR+L+D+LCSL  N VRP L C + +  DG I D
Sbjct: 237 EGSKLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNAVRPVLACRMILADDGAIED 296

Query: 301 DIRFFAANIKSHARLVYDHVSDWLETGSSEQWQP-SEEIAQVVRDLYAFSQARANWRETH 359
           DI+FFAA I+S A+L YD VSDWLE   S  WQP SE +A+ ++ L      R+ WR+ H
Sbjct: 297 DIQFFAATIESKAKLAYDDVSDWLENNGS--WQPDSETVARQIKLLQEVCLRRSEWRKNH 354

Query: 360 AVVFPDRPDYRFELSADNDVVAIHADMRRTANRLVEESMITANICAGKTLQTTFGFGVFN 419
           A+VF DRPDYRF L    +V+ I A+ RR ANR+VEESMI ANICA + L+   GFGV+N
Sbjct: 355 ALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYN 414

Query: 420 THAGFKAEKMADVVELMAVNGAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQS 479
            H GF       +  L+  +   + D   + T+EGF  LRR L  Q + +LD+RIR++QS
Sbjct: 415 VHTGFDPANTEQLAALLKTHDV-HVDPVEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQS 473

Query: 480 YSEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAPVQTPDETVGEELA 539
           ++EI  +P PHF +GL+ YATWTSPIRKYGDMINHRLLKA I G+A +  P + V  ++A
Sbjct: 474 FAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEA-ISRPQDDVAIQMA 532

Query: 540 LHRKHHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLENGAMAFIPGA 599
             R+ +++AER+V DWLYAR L  +    TRF AEI D++R GMRVRL++NGA+AFIP  
Sbjct: 533 ERRRLNRMAERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAP 592

Query: 600 LILDNKERIECNGEDGTVLIDKEVVYKLGDVLEIVLTEVNQENRSLVGKP 649
            +   ++ + C+ E+GTV I  EVVYK+ DV+++ + EV  E RS++ +P
Sbjct: 593 FLHAVRDELVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARP 642