Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  283 bits (723), Expect = 2e-80
 Identities = 153/368 (41%), Positives = 223/368 (60%), Gaps = 7/368 (1%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           F+DL L+  +LSA+T+ G+  PTPIQ  AIP  L+ RD LG AQTGTGKTA+F LP+L  
Sbjct: 4   FADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLTL 63

Query: 88  LNLSQYK---PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKS 144
           L   + +   P+ +++ PTRELA QVA      G+N K L +  + GG S  +Q R L+ 
Sbjct: 64  LEKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHK-LNIALLIGGVSFDEQDRKLER 122

Query: 145 GAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRV 204
           GA +++ TPGR+ D   R +L +      ++DEAD ML MGF+ D+  I +  P + Q +
Sbjct: 123 GADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQTL 182

Query: 205 LFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKG--VEKDEAMARLLET 262
            FSATMPP ++++ +RFL+NPE ++VA  + T   V Q++    G   EK   +  L+ +
Sbjct: 183 FFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELIRS 242

Query: 263 EET-DASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVA 321
           +E    +I+F   ++D   L   L   GF   ALHGD+ Q  R   + + K G I +LVA
Sbjct: 243 QEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLLVA 302

Query: 322 TDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIE 381
           +DV ARGLD+P ++HV+N+D+P   E Y+HRIGRTGRAGR G A  +V   + +    IE
Sbjct: 303 SDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDAIE 362

Query: 382 RVTRSSME 389
           ++    +E
Sbjct: 363 KLIGQKVE 370