Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  285 bits (730), Expect = 3e-81
 Identities = 158/362 (43%), Positives = 225/362 (62%), Gaps = 7/362 (1%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           F +L L+  I++ L+  GF  PTPIQA AIP++L+  D +G AQTGTGKTAAF LP++ K
Sbjct: 4   FKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIEK 63

Query: 88  LNLSQYKP-----QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRAL 142
           L     +P     +A+V+APTREL  Q+AA +K L      LK+  + GG SI  Q   L
Sbjct: 64  LVADGRRPDPRNIRALVLAPTRELVNQIAANLK-LFVKKSPLKIGLVVGGVSINKQTEQL 122

Query: 143 KSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQ 202
             G  I+V TPGR+ DL++R  + L +    +LDEAD+ML +GF+ D+  I +  P++ Q
Sbjct: 123 ARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNRQ 182

Query: 203 RVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLE 261
            +LFSATMP ++ E+   +L +P  V+V+   +   KVEQ    V G + K   + + L 
Sbjct: 183 TLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQTLT 242

Query: 262 TEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVA 321
                 S++F RT+   E+L   L   GFKAA++HG+  Q  RER +   + G I +LVA
Sbjct: 243 ANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVLVA 302

Query: 322 TDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIE 381
           TDV ARG+D+P +THVYNYD+P   ++Y+HRIGRT R GR G AI     ++IR+LR IE
Sbjct: 303 TDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDIE 362

Query: 382 RV 383
           ++
Sbjct: 363 KL 364