Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  278 bits (710), Expect = 9e-79
 Identities = 147/359 (40%), Positives = 218/359 (60%), Gaps = 4/359 (1%)

Query: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
           F+DL L+   L A+ E+G+ +PTPIQ  AIP +  GRD LG AQTGTGKTA+F+LP+++ 
Sbjct: 3   FADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMIDI 62

Query: 88  LNLSQYK---PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKS 144
           L   + K   P+++++APTRELA QV+      G+  K L +  + GG S+ +Q + L  
Sbjct: 63  LASGKAKARMPRSLILAPTRELATQVSENFTLYGKYQK-LSMALLIGGESMNEQQKVLDR 121

Query: 145 GAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRV 204
           G  +++ TPGR+ DL  R  + L +    ++DEAD ML MGF+ DV  I+   P+  Q +
Sbjct: 122 GVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKIRQTL 181

Query: 205 LFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEE 264
            FSATM   ++ + + FL NP+ V +  + +    VEQ   +VK  EK EA+ +LL  E 
Sbjct: 182 FFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLLRRET 241

Query: 265 TDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDV 324
              + +F   ++D + L   L   GF   ALHGD+PQ +R   ++  K+  + ++V +DV
Sbjct: 242 VTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMVCSDV 301

Query: 325 VARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERV 383
            ARG+DV  ++HV+N+D+P   E YIHRIGRTGRAGR G+A  L      + LR IE +
Sbjct: 302 AARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAIENL 360