Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., putative ATP-dependent RNA helicase RhlE from Phaeobacter inhibens DSM 17395

 Score =  282 bits (722), Expect = 2e-80
 Identities = 176/494 (35%), Positives = 266/494 (53%), Gaps = 26/494 (5%)

Query: 27  QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
           +FSDL LN  +L A+ E G+ SPTPIQA AIP  LEGRD LG AQTGTGKTA+F+LP++ 
Sbjct: 3   KFSDLNLNPKVLKAIEEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT 62

Query: 87  KLNLSQYK---PQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALK 143
            L   + +   P+++V+ PTRELA QVA       +++K  K L I GG S  +Q   + 
Sbjct: 63  LLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLI-GGVSFKEQDTLID 121

Query: 144 SGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQR 203
            G  +++ TPGR+ D   R +L L +    ++DEAD ML MGF+ D+  I    P + Q 
Sbjct: 122 KGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLTPFTRQT 181

Query: 204 VLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVK-------GVEKDEAM 256
           + FSATM P ++ I   FL  P  V+VA    T   + Q   + K       G EK + +
Sbjct: 182 LFFSATMAPEIERITNTFLSAPARVEVARQATTSENITQGVVLFKASRRDREGSEKRKLL 241

Query: 257 ARLL--ETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQG 314
             L+  E E+   +I+F   + D + +A  L   G+ AA +HGD+ QS R +T++  ++G
Sbjct: 242 RHLIDQEGEKCTNAIIFCNRKTDVDIVAKSLKKYGYDAAPIHGDLDQSQRTKTLEGFREG 301

Query: 315 VIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 374
            +  LVA+DV ARGLDVP ++HV+N+D+P   E Y+HRIGRTGRAGR G A+++      
Sbjct: 302 SLRFLVASDVAARGLDVPSVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGSAMMICVPKDE 361

Query: 375 RMLRTIERVTRSSMEEIQLPHRDKVAESRLTKLGQELAAD---------KEFSSLERFAD 425
           + L  IER+ ++ +  I+ P +   AE +      + +++         +  +      D
Sbjct: 362 KNLEDIERLVQNEIPRIENPLKKAKAEPKAKDSKDDASSETTERKTRSRRPSARSSAAKD 421

Query: 426 LVEKLQASLEIDATTLAAILLKRQQGKRPLFYVGADPMIEAMEREKSRRRERRDDRRDGD 485
           + E   A  +I     A +    Q+ K P     A    +  E + S  +      + G+
Sbjct: 422 VNESADAQAQISDAPSAEVDAPAQEQKAPEQEKRASGRGKPAESKSSGPK----SGQKGN 477

Query: 486 RPARREFGGRDQEN 499
           + + R  GG D+ N
Sbjct: 478 QKSGRGRGGNDRGN 491