Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  494 bits (1271), Expect = e-144
 Identities = 274/633 (43%), Positives = 398/633 (62%), Gaps = 25/633 (3%)

Query: 21  MQDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAF 80
           M  +   F+ L L+  IL ALT++G+ +P+ IQA  IP+L+EG+D LG AQTGTGKTAAF
Sbjct: 1   MTSSVDTFAQLGLSEPILQALTDVGYETPSSIQAECIPLLMEGKDLLGMAQTGTGKTAAF 60

Query: 81  SLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMR 140
           +LPLL KL+++Q  PQA+V+APTRELAIQVA   +   +++ G  VL IYGG S+  Q++
Sbjct: 61  ALPLLQKLDVTQRFPQALVLAPTRELAIQVAEACQKYAKHLPGFHVLPIYGGQSLGIQLK 120

Query: 141 ALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPES 200
            L+ GAH+++GTPGRV D + R  L L    T +LDEADEML+MGF+DDV WI+E  P  
Sbjct: 121 QLQRGAHVIIGTPGRVMDHLERKSLDLSRLKTLVLDEADEMLRMGFIDDVEWILEHIPAE 180

Query: 201 AQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLL 260
            Q  LFSATMP  ++ + +++LR+P+ V +  +  TV+ ++Q+YW V G+ K +A+ R++
Sbjct: 181 RQTALFSATMPEQIRRVAQKYLRDPQEVKIKSATSTVSAIQQRYWQVSGLHKLDALTRIM 240

Query: 261 ETEET-DASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319
           E E++ DA+I+FVRT+  TE LA  L ARG+ AAAL+GD+ Q+ RER ++ +K G +DI+
Sbjct: 241 EVEDSLDAAIIFVRTKTATEELAQKLEARGYAAAALNGDMNQASRERVIEQLKSGGLDIV 300

Query: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379
           +ATDV ARG+DVPR++HV NYDIP+DVE+Y+HRIGRTGRAGR G AIL V   ++RMLRT
Sbjct: 301 IATDVAARGIDVPRVSHVINYDIPYDVEAYVHRIGRTGRAGRTGTAILFVSPREMRMLRT 360

Query: 380 IERVTRSSMEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDAT 439
           IE+VTR ++  ++LP +  VA+ R+ +  Q++    E   L  F ++V +++    + A 
Sbjct: 361 IEKVTRQNISPLRLPTKQDVADRRVAQFKQQVIKTLEAGELSFFEEVVTQIEEEANVGAH 420

Query: 440 TLAAILLKRQQGKRPLFYV----------GADPMIEAMER----EKSRRRERRDDRRDGD 485
            +AA L    Q  RPL              A+   E  ER    E+  R ER++    G+
Sbjct: 421 EVAAALAFLVQKSRPLLMPEKEVRSFEADSAEGRPERKERFERPERGERFERKERPERGE 480

Query: 486 RPAR---REFGGRDQEN-HDWDTYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLA 541
           R  R   ++  GRD  N  +   Y+++VGR+QG   KDIVG +ANE  +    IG I L 
Sbjct: 481 RLERTDAKKGKGRDLGNVGNMVRYRIEVGRNQGATPKDIVGCIANEADIQSRYIGHIALF 540

Query: 542 QGHTFVQLPKAMSNDVSSKLRKLRIRQKEVGAVVCDFDDFRESRGGARREGGPRREGGRR 601
             ++ V+LP ++  D    L+++ I+Q  +  ++   D   E     RR+ G   +G R 
Sbjct: 541 DEYSTVELPDSLPKDALMLLKEVEIKQCPL--LIHRLDGESEVIAPPRRKWGGDVDGNRA 598

Query: 602 PEGNREGGFRGGREGG----REGGRGRGGEGRP 630
           P G   GG  G  + G    + GG G  G  +P
Sbjct: 599 PRGAAPGGKGGFSKPGFGNKKPGGTGGFGGNKP 631