Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  280 bits (717), Expect = 8e-80
 Identities = 152/376 (40%), Positives = 224/376 (59%), Gaps = 11/376 (2%)

Query: 26  IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
           + F  L LN  IL A+ E G+V PTPIQ  AIP +L+GRD +  AQTGTGKTA F+LPLL
Sbjct: 1   MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 86  NKLNLSQYKP--------QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILD 137
              +L Q +P        +A+++ PTRELA Q+   +++  + +  ++ L ++GG SI  
Sbjct: 61  Q--HLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLN-VRSLVVFGGVSINP 117

Query: 138 QMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQA 197
           QM  L+SG  I+V TPGR+ DL  ++ + LD+    +LDEAD ML MGF+ D+  ++ + 
Sbjct: 118 QMMKLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKL 177

Query: 198 PESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMA 257
           P   Q +LFSAT    +K + E+ L NP  ++VA  N    +V Q    V    K E ++
Sbjct: 178 PAKRQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLS 237

Query: 258 RLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVID 317
           +++        +VF RT+     LA+ L   G ++AA+HG+  Q  R R +   K G I 
Sbjct: 238 QMIGEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIR 297

Query: 318 ILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRML 377
           +LVATD+ ARGLD+  + HV NY++P   E Y+HRIGRTGRA   G+A+ LV  ++ ++L
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357

Query: 378 RTIERVTRSSMEEIQL 393
             IER+ +  +  I L
Sbjct: 358 HDIERLLKKEIPRIAL 373