Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., ATP-dependent RNA helicase RhlE from Enterobacter sp. TBS_079

 Score =  285 bits (728), Expect = 4e-81
 Identities = 154/378 (40%), Positives = 223/378 (58%), Gaps = 7/378 (1%)

Query: 26  IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
           + F  L LN  IL A+ E G+V PTPIQ  AIP +L+GRD +  AQTGTGKTA F+LPLL
Sbjct: 1   MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 86  NKLNLSQ-----YKP-QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQM 139
             L  +Q      +P +A+++ PTRELA Q+   ++   + +  ++ L ++GG SI  QM
Sbjct: 61  ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLN-IRSLVVFGGVSINPQM 119

Query: 140 RALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE 199
             L+ G  ++V TPGR+ DL  ++ L LD     +LDEAD ML MGF+ D+  ++ + P 
Sbjct: 120 MKLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPP 179

Query: 200 SAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARL 259
             Q +LFSAT    +K + E+ L NP  V+VA  N    ++ Q    V    K E ++ +
Sbjct: 180 RRQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKRELLSHM 239

Query: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319
           +        +VF RT+     LA+ L   G ++AA+HG+  Q  R R +   K G I +L
Sbjct: 240 IGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRVL 299

Query: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379
           VATD+ ARGLD+  + HV NY++P   E Y+HRIGRTGRA   G+A+ LV  ++ ++LR 
Sbjct: 300 VATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRD 359

Query: 380 IERVTRSSMEEIQLPHRD 397
           IER+ R  +  I+ P  D
Sbjct: 360 IERLLRKEIPRIETPGYD 377