Pairwise Alignments

Query, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  274 bits (700), Expect = 7e-78
 Identities = 146/362 (40%), Positives = 218/362 (60%), Gaps = 7/362 (1%)

Query: 26  IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
           + FS L+L+S +++ L E+G+  PTPIQ  AIP +L  +D +  AQTGTGKTAAF+LP+L
Sbjct: 1   MSFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAKQDVMAGAQTGTGKTAAFALPIL 60

Query: 86  NKL---NLSQYKPQ---AIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQM 139
            +L   N SQ  P+   A+V+ PTRELA+QV        +    ++V   YGG SI  Q 
Sbjct: 61  QQLLIDNESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQ 119

Query: 140 RALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPE 199
              K+G  +++ TPGR+ D + +  L+L      + DEAD ML MGF+D++  +++Q P 
Sbjct: 120 AEFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLKQVPA 179

Query: 200 SAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARL 259
             Q +LFSAT+   +    +  LR+P+ ++VA  N T A+VEQ+ + +    K E ++ L
Sbjct: 180 QRQTLLFSATLDDSIFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDSDRKTEFVSHL 239

Query: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319
           + ++     ++F RT+Q  ++L   L   G    A HGD+ Q  RE+ +   KQG++ +L
Sbjct: 240 VRSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGLVQVL 299

Query: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379
           VATDV ARGLD+  + +V N+++PF  E YIHRIGRTGRAG  G AI L       +L  
Sbjct: 300 VATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEE 359

Query: 380 IE 381
           +E
Sbjct: 360 VE 361