Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

 Score = 82.8 bits (203), Expect = 6e-21
 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 22/185 (11%)

Query: 122 GYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKG 181
           GY RVST +Q   +QL  +++AG   S+  F+  E +SG      RP F  + +  L  G
Sbjct: 4   GYARVSTKDQNLERQLDELKKAG---SEKIFL--EKISG--TKRNRPEFDKMFDI-LRAG 55

Query: 182 DTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEF 241
           D +++ +L R+ R   D+ ++V+     G+++  L     D +S  GKL+  +FA  AEF
Sbjct: 56  DIIIVTELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEF 115

Query: 242 EKNRISERIRDKLKQLKQEGKALGRP---------TKNVYDD-----VQELKAQGISQRT 287
           E++ ISER++  L   +  G+  GRP            +YD       Q LKA GIS+ T
Sbjct: 116 ERDLISERVKSGLNAARSRGRLGGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFT 175

Query: 288 IADKL 292
           + + L
Sbjct: 176 LYNYL 180