Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 195 a.a., recombinase family protein from Methanococcus maripaludis JJ

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 22/195 (11%)

Query: 122 GYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKG 181
           GY RVST +Q   +Q+  ++  G +      I  E +SG      RP F  ++E  L K 
Sbjct: 4   GYARVSTKDQKLDRQIDELKSFGCEK-----IFLEKISG--TKKIRPEFDKMLE-MLRKN 55

Query: 182 DTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEF 241
           D +V+++L RL R   D+  ++       + +  L     D S+  GKL+  +FA  AEF
Sbjct: 56  DLVVVSELTRLSRSTKDLIDIMNRFEQMDVSVKSLKEAWLDTSTAHGKLLFTIFAGLAEF 115

Query: 242 EKNRISERIRDKLKQLKQEGKALGRPT---------KNVYDDVQE-----LKAQGISQRT 287
           E++ ISER++  L   +  GK  GRPT           +YD  +      LKA GIS+ T
Sbjct: 116 ERDLISERVKSGLNAARSRGKLGGRPTVRNEKINLALKMYDSKEYSINEILKATGISKST 175

Query: 288 IADKLNVSLSTVRRN 302
           + + L      + +N
Sbjct: 176 LYNYLEKRRECIIQN 190