Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., site-specific recombinase, resolvase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 57/197 (28%), Positives = 102/197 (51%), Gaps = 12/197 (6%)

Query: 122 GYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVDEGVSGGVCAMERPAFRNLVENKLEKG 181
           GY RVS+  Q+   QL+ +    H+   N+ I  E  SG     ER  F++ + + L +G
Sbjct: 5   GYARVSSTGQSLEVQLSKL----HRAECNK-IYQEKRSGRTA--ERSEFQSCM-SYLREG 56

Query: 182 DTLVIAKLDRLGRDNIDVQQVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEF 241
           DTLV+ +LDRL R  + + Q+      +GI L ++D  + D S+  G+LM  M A  AEF
Sbjct: 57  DTLVVTRLDRLARSVVHLAQIASRFQSEGIDLLVIDQNI-DTSTSTGRLMFNMLAAIAEF 115

Query: 242 EKNRISERIRDKLKQLKQEGKALGRPTK---NVYDDVQELKAQGISQRTIADKLNVSLST 298
           E +  +ER  + + +  + G   GRP K    +   + + +A+G +   +A + ++  ++
Sbjct: 116 ENDLRTERQAEGIAKAHENGVKFGRPVKLTDTLKQAIYDKRAEGATIGQLAKEYHLGEAS 175

Query: 299 VRRNWVDTKRSLEVVTE 315
           + R     K + E+ ++
Sbjct: 176 IYRALNSVKSTQEITSK 192