Pairwise Alignments

Query, 318 a.a., resolvase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., site-specific recombinase, resolvase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 27/202 (13%)

Query: 121 YGYGRVSTDEQTTSQQLTAIREAGHKVSDNRFIVD----EGVSGGVCAMERPAFRNLVEN 176
           +GY R ST +Q   +  + +++    V D  F +     E  SG   +++RP    L+++
Sbjct: 4   FGYLRASTSDQNAKRAQSTLQKF---VQDRGFRIAGWYIENESGA--SLQRPELLRLLDD 58

Query: 177 KLEKGDTLVIAKLDRLGR-DNIDVQQVVQMLTDKGIKLFILDLPVADLS-SPE------- 227
              KGD ++I ++DRL R D      + +ML  K +K+  LDLP + ++ SP+       
Sbjct: 59  AA-KGDAIIIEQIDRLSRLDEKSWFTLKEMLHGKELKVISLDLPTSHIALSPQITDEFTG 117

Query: 228 ------GKLMLQMFATFAEFEKNRISERIRDKLKQLKQEGKALGRPT-KNVYDDVQELK- 279
                   +M+ M A  A  +      R  + +K+ K+ GK  GR    ++++ + +L+ 
Sbjct: 118 SMIKAINSMMMDMLAAIARKDYQDRRRRQAEGIKKAKEGGKYRGRQADSDLHEKIYQLRV 177

Query: 280 AQGISQRTIADKLNVSLSTVRR 301
              +S    A   NVS  TV R
Sbjct: 178 VNKLSISDTAKLTNVSDRTVIR 199