Pairwise Alignments

Query, 459 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 830 a.a., Site-specific recombinase XerD from Pseudomonas stutzeri RCH2

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 293 TVNGYMQDIRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTESEVIALIDYFKHG-Y 351
           T   + +  RA+   A   G I ++ A  L    +  + P+  T S   + I+   HG  
Sbjct: 532 TAKKFFELARALVTYAHDQGHITENIAAGLAFSTKGAEAPRKRTYSP--SQIEKLLHGPA 589

Query: 352 FTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDIRQSANGLCWYIDINDRGD 411
           +T  +  +  L+  K+  W+P +   TGARL+E+ QLR  DIRQ      W I IN  G 
Sbjct: 590 YTLTQPPRWRLDDYKF--WLPLLGLYTGARLSELCQLRLEDIRQELG--AWIISINRTGS 645

Query: 412 NVVKNKSSNRIVPL 425
             +K   S R+VP+
Sbjct: 646 KQLKTSDSERLVPI 659