Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (557), Expect = 4e-61
 Identities = 144/452 (31%), Positives = 245/452 (54%), Gaps = 20/452 (4%)

Query: 187 QEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEEL--AVIHIGFANA 244
           ++I   + A+ QI++   HD  TG  NR  L  +L+ Q++ L +H+ L  A++ +   + 
Sbjct: 271 RDIGALKNAQAQIQHLAYHDPLTGLPNRALLLDRLSQQVS-LLQHQNLRGALLFLDLDHF 329

Query: 245 RQLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLIL-----KAHPLDTQLN 299
           + +   LG+ + D VL  +  RL      E   AR       +++         +  Q+ 
Sbjct: 330 KHINDSLGHPVGDSVLSIIAARLEASVRQEDTVARLGGDEFVVLICGLEGSQDEVTRQVR 389

Query: 300 QLCHRLIHAGQAQFVTEGLPVHLNPYIGVALSRETR-DPQQLLRHAVSSMLACKDSGYKV 358
           +L   L +        +G  + + P IGV L  +    P  LL+ A  ++   KD G   
Sbjct: 390 ELADNLRNLLAEPMFLDGHRLQVTPSIGVVLIPDDGLTPADLLKRADIALYRAKDCGRNA 449

Query: 359 --FFHSPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPV 416
             FFH  ++    +++ +LEN L  A+  N+  L+FQ +V  + +   GAEALLRW+HP 
Sbjct: 450 SQFFHV-SMQQAVSQRLRLENDLRLALTRNEFHLHFQAQVDCRNEYITGAEALLRWQHPE 508

Query: 417 LGEFSNETLIHMAEQNGLIFEVGHFVLHQALKAASDWL--AVCPT--FCIAINVSSVQLK 472
            G  + +  + + E++G+I EVG  +L++A K     L   + P   F + +N+S  Q  
Sbjct: 509 YGLLAPDQFVQILEESGMILEVGSHILNEACKTGGLLLRQGLIPENRFLMGVNISPRQFL 568

Query: 473 NSGFVEQIRDLLALYCFPAHQLELEITESGLIVD--EPTASDILNRLHTLGVTLSLDDFG 530
              F+E++   L L+  PA  L+LEITE G+++   + T   +L+ L  LGV+ ++DDFG
Sbjct: 569 QHDFIERVERSLTLHQLPASMLKLEITE-GIVIQNLDDTILKMLS-LKALGVSFAMDDFG 626

Query: 531 TGYASFQYLKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQ 590
           TGY+S  YLK+ P D +KID+SF++   +  +D EI+R+++ +A+ LNLNV+ EG+E+++
Sbjct: 627 TGYSSLTYLKRLPVDTLKIDQSFVQDATNDPNDAEIIRAIVAMAQSLNLNVIAEGVETSE 686

Query: 591 QEQFILEQGCDVGQGFLYGKPMPSEVFTLKLE 622
           Q  F+ + GC   QG+L+ +P+P   F   LE
Sbjct: 687 QLAFLEKVGCYTYQGYLFSEPLPGPQFESLLE 718