Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  229 bits (584), Expect = 4e-64
 Identities = 138/447 (30%), Positives = 232/447 (51%), Gaps = 8/447 (1%)

Query: 185 LHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQ-LAEHEELAVIHIGFAN 243
           +  +I +++  E+++ +  SHD+ TG  NR  LE +L       L +   LA++ I    
Sbjct: 480 VQNDITEQKRYEEELSFSASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILFIDLDG 539

Query: 244 ARQLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLCH 303
            + +   +G+   D +L ++ +R+          AR       ++L    L+  +  +  
Sbjct: 540 FKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDVISIAD 599

Query: 304 RLIHAGQAQFVTEGLPVHLNPYIGVALSR-ETRDPQQLLRHAVSSMLACKDSGYKVF-FH 361
           RL+ +    +  +G+ +H+   +G+ LS  +   P QL++ A  +M   K  G   + ++
Sbjct: 600 RLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNNYQWY 659

Query: 362 SPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEFS 421
           +  L      +  L N L +A+      LYFQPK+   + + +G EALLRW+HP +G  S
Sbjct: 660 TNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFIS 719

Query: 422 NETLIHMAEQNGLIFEVGHFVLHQALKAASDWLA---VCPTFCIAINVSSVQLKNSGFVE 478
             T + +AE  G I  +  +VL  A +   D L      P+  +A+N+S+VQ +   FV+
Sbjct: 720 PATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPS--VAVNISTVQFRRINFVK 777

Query: 479 QIRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQY 538
            ++  L  Y   +  LE+EITE+ L  +   A + L RL  LGV +S+DDFGTG++S  Y
Sbjct: 778 SVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSY 837

Query: 539 LKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQ 598
           LK+ P D +KID+SF+++I     D  I + ++ +A  L LNVV EG+E+ QQ +F+ + 
Sbjct: 838 LKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQS 897

Query: 599 GCDVGQGFLYGKPMPSEVFTLKLESHA 625
            CD  QG+ + KPMP E     L   A
Sbjct: 898 NCDQYQGYYFAKPMPFEALKQYLMDEA 924