Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1431 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  219 bits (559), Expect = 5e-61
 Identities = 142/438 (32%), Positives = 229/438 (52%), Gaps = 6/438 (1%)

Query: 188  EIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEELAVIHIGFANARQL 247
            +I +R+  E+++    ++DL TG  NR+ L+  L   L +   H  L V+ +   N +++
Sbjct: 983  DISRRKQQEEELRKLTNNDLLTGLPNRSNLQVSLN-NLVKKDTHHTLMVLDLD--NFKKI 1039

Query: 248  QARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLCHRLIH 307
               LG+ + D++L+ +  R+     G     R       ++L   P       +   L+ 
Sbjct: 1040 NDSLGHQVGDELLQLVSRRMSAALPGHTSLYRLGGDEFAVLLDKDPDIGSAAAIAKGLVD 1099

Query: 308  AGQAQFVTEGLPVHLNPYIGVALSRETRDPQQ-LLRHAVSSMLACKDSGYKVF-FHSPAL 365
            A  A F   G  + +   IG+ L  E    +Q LLR A  +M   K +G   + F+S +L
Sbjct: 1100 AFVAPFELAGEKLVVGVSIGIVLYPEDEQNEQALLRKADIAMYHAKSAGGNRYQFYSESL 1159

Query: 366  ADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEFSNETL 425
              N  RQ ++EN +   +R++   +Y+QPKV ++  R  G EAL+R  HP  G       
Sbjct: 1160 NRNALRQLEVENLIRDGLRDDLFEVYYQPKVDLRNSRMAGMEALVRLNHPTQGLIPPSEF 1219

Query: 426  IHMAEQNGLIFEVGHFVLHQALKAASDWLAV-CPTFCIAINVSSVQLKNSGFVEQIRDLL 484
            I +AE+ GLI E+G  V+ +A  AA  W         +A+N+SS Q   +   ++I  +L
Sbjct: 1220 IPLAEETGLIVEIGDLVMRKACFAAQRWREQGLFDGRVAVNLSSRQFALTDLQQRIESIL 1279

Query: 485  ALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQYLKKFPF 544
             L   PA  LELEITE  +I     A  ++ +L  +GV+L+LDDFGTGY+S  YLK+FP 
Sbjct: 1280 RLTKLPAANLELEITEGTVIKQPEKAIKVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPI 1339

Query: 545  DGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQGCDVGQ 604
              +KIDK+F++ I+ S+ D ++V S++ +A  + L VV EG+E   Q   +    C+  Q
Sbjct: 1340 HTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEVPSQLNILRALKCEEVQ 1399

Query: 605  GFLYGKPMPSEVFTLKLE 622
            G++Y K +P   FT  L+
Sbjct: 1400 GYIYSKAVPEAEFTTLLK 1417