Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  224 bits (572), Expect = 1e-62
 Identities = 147/443 (33%), Positives = 224/443 (50%), Gaps = 5/443 (1%)

Query: 184 SLHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAE-HEELAVIHIGFA 242
           ++ +++  R+ AE++I Y  ++D  T   NR     +L   + Q    H  LAV+ I   
Sbjct: 425 AVDEDVTARKKAEERIRYLSNYDTLTRLPNRVLFRDRLYQAVVQARRGHGGLAVMFIDLD 484

Query: 243 NARQLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLC 302
               +   LG+   D +L  +  R+    E     AR       LI  A         L 
Sbjct: 485 QFSLVNDTLGHAAGDHLLMTIASRINAAAEEADTVARVGGDEFALIQTALTSADSAASLA 544

Query: 303 HRLIHAGQAQFVTEGLPVHLNPYIGVAL-SRETRDPQQLLRHAVSSML-ACKDSGYKVFF 360
            RLI   +      G  V +   +G+A+  ++  DP  L+++A  +M  A K       F
Sbjct: 545 RRLIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSGDDSCCF 604

Query: 361 HSPALADNHARQNQLENYLLQAVRNND-LLLYFQPKVSMKTQRWVGAEALLRWKHPVLGE 419
            S  +    A +  LE  L +A+ + D L L++Q +  +++ R VGAEAL RW HP LG 
Sbjct: 605 FSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHYQLQFCIESGRPVGAEALARWTHPTLGA 664

Query: 420 FSNETLIHMAEQNGLIFEVGHFVLHQALKAASDWLAV-CPTFCIAINVSSVQLKNSGFVE 478
                 I +AE +GLI  +G +VL  AL   + W A  C    IA+N+S+VQ +  G VE
Sbjct: 665 IPPTRFIPVAEDSGLILALGDWVLGTALAEYARWRAAGCGRLTIAVNMSAVQFRQKGLVE 724

Query: 479 QIRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQY 538
           ++ DLLA +  P   LELE+TES L+ D   A   L  L   G+ LS+DDFGTGY+S  Y
Sbjct: 725 RVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQLTALSQAGIRLSIDDFGTGYSSLGY 784

Query: 539 LKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQ 598
           LK F  D +K+D+SF+  +    +D  I R+++++   L L V+ EG+E+ +Q  ++  +
Sbjct: 785 LKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINLGHSLGLEVIAEGVETPEQMAYLRRE 844

Query: 599 GCDVGQGFLYGKPMPSEVFTLKL 621
           GCDV QG+L   P P E    +L
Sbjct: 845 GCDVVQGYLMAYPEPGETVARRL 867