Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  217 bits (553), Expect = 1e-60
 Identities = 129/427 (30%), Positives = 230/427 (53%), Gaps = 3/427 (0%)

Query: 194 AAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEE-LAVIHIGFANARQLQARLG 252
           A   ++ +  +HD  T   NR  L  ++    A    +++ +A++ I   + + L   LG
Sbjct: 384 AMSLKMSHLANHDQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLNDSLG 443

Query: 253 YHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLCHRLIHAGQAQ 312
           +   D V+KQ+ +RL  + +      R       L+L +    +Q++ +   ++ +    
Sbjct: 444 HSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLLPSLTATSQVDSIATDIVRSLNTP 503

Query: 313 FVTEGLPVHLNPYIGVAL-SRETRDPQQLLRHAVSSMLACKDSGYKVF-FHSPALADNHA 370
           F  +G    L+  +G+++   +    ++L+ H  ++M   KD G   F + S  L     
Sbjct: 504 FRIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAAMYRAKDLGRNRFCYFSEDLEQELT 563

Query: 371 RQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEFSNETLIHMAE 430
           ++++L   L  A+    + +Y+QPKV +KT+  +GAEAL R   P     S    I +AE
Sbjct: 564 KRHELVTLLRTAIDTEAIEVYYQPKVDLKTKEIIGAEALARLYDPSGKLISPLDFIPLAE 623

Query: 431 QNGLIFEVGHFVLHQALKAASDWLAVCPTFCIAINVSSVQLKNSGFVEQIRDLLALYCFP 490
           + GLI ++G  +L Q+  AA  W        IA+N+++ Q  N  F + +  +L L    
Sbjct: 624 ETGLIHQLGEIILKQSCMAAKAWQKRGRPLQIAVNIAAKQFTNPEFCDSVAKVLELTGLD 683

Query: 491 AHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQYLKKFPFDGIKID 550
           +  LELE+TES L+ D   A ++LN L +LG+++++DDFGTGY+S  YLK FP + +KID
Sbjct: 684 SSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLKID 743

Query: 551 KSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQGCDVGQGFLYGK 610
           +SF++ +   E   +IV++++H+AK L L ++ EGIE  +Q Q ++   C+ GQG+++ K
Sbjct: 744 QSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMFSK 803

Query: 611 PMPSEVF 617
           P+P + F
Sbjct: 804 PLPLKEF 810