Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1072 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  213 bits (541), Expect = 5e-59
 Identities = 140/438 (31%), Positives = 228/438 (52%), Gaps = 8/438 (1%)

Query: 184  SLHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEELA-VIHIGFA 242
            +L  +I   +A E QI YQ  HD  TG  NR  L ++LA +L +      L  +++I   
Sbjct: 611  ALFHDISDLKAKEAQIRYQGMHDALTGLPNRALLLERLAGELKEGQGTGRLCGLLYIDID 670

Query: 243  NARQLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLC 302
            N + +   LG+   D  + ++ E L  +   E   +R       +++     + ++  + 
Sbjct: 671  NFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDTLSRLGGDEYVILVANPGEEREVVLVA 730

Query: 303  HRLIHAGQAQFVTEGLPVHLNPYIGVALS-RETRDPQQLLRHAVSSMLACKDSGYKVFFH 361
             R++H            +H+   IG+A+   + + P +LL +A  +M   K  G   +  
Sbjct: 731  ERILHHFSQPIALLDRELHVGLSIGIAIHPADGKGPDELLTNADLAMYRAKAQGKNTYER 790

Query: 362  -SPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEF 420
             SP L D    + +LE  L  A+R+ +++ +FQP+V + T R VGAEAL RW  P     
Sbjct: 791  FSPHLHDRIRSRMELEGRLRHALRHGEIVPHFQPRVDLATGRIVGAEALARWTLPDGTRI 850

Query: 421  SNETLIHMAEQNGLIFEVGHFVLHQAL---KAASDWLAVCPTFCIAINVSSVQLKNSGFV 477
            S    I +AE  GLIF++G  +L  +L   +A  D     P   +A+N+S VQ +++  V
Sbjct: 851  SPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALMD--EGLPDITMAVNLSLVQCRHADLV 908

Query: 478  EQIRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQ 537
             ++   L     P  +LELEITES ++ D       L+RL  LG+TL++DDFGTGY+S  
Sbjct: 909  GRVLAALRDTGVPPERLELEITESAIMSDVTRTLRRLDRLAALGITLAVDDFGTGYSSLY 968

Query: 538  YLKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILE 597
            +LK  P   +KID+SF+  + H    + I  +ML +A+ L+L+V+ EG+E+  Q  F+ +
Sbjct: 969  HLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAMARNLDLDVIAEGVETGAQMHFLRD 1028

Query: 598  QGCDVGQGFLYGKPMPSE 615
             GC V QGFL+   +P +
Sbjct: 1029 HGCRVVQGFLFSPAVPGD 1046