Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  240 bits (612), Expect = 4e-67
 Identities = 158/501 (31%), Positives = 271/501 (54%), Gaps = 15/501 (2%)

Query: 122  LCVTDRQARQFLSTDQQLIKTFAESIEAQLKTLYQRETL--LQMNQDLHFKVRHKMQSIA 179
            L  + +Q   F S +QQL++    + E  ++   ++  L  L++NQ +  K         
Sbjct: 1002 LAYSRQQRDLFNSIEQQLLRHKHWAGEIWIRNRARKAILVWLEINQVIDVKGE------T 1055

Query: 180  SLNQSLHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEEL-AVIH 238
            S   ++  +I +R+ AE+ + +  S D  TG  NRT  + +L   ++Q      + A++ 
Sbjct: 1056 SHFVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLF 1115

Query: 239  IGFANARQLQARLGYHLWDDVLKQLRERL-GPVTEGELLTARPNSTNLTLILKAHPLDTQ 297
            +     + +   +G+H+ D +LK +  RL   V EG+ + AR      T+IL+       
Sbjct: 1116 LDLDRFKHINDSMGHHIGDLLLKAVAHRLQNAVREGDTV-ARLGGDEFTIILEGVAKTKA 1174

Query: 298  LNQLCHRLIHAGQAQFVTEGLPVHLNPYIGVAL-SRETRDPQQLLRHAVSSMLACKDSGY 356
               +  +++ A QA F+ +   + ++  IG++L   +  D   L++ A ++M   K  G 
Sbjct: 1175 ATLISEKVLKAFQAPFLLDDKSLTISTSIGISLYPNDAEDVDSLIKFADTAMYHAKALGR 1234

Query: 357  KVF-FHSPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHP 415
              F F++  L +   R  QLE  L QA+  N+L L +QPK  ++     G EALLRW H 
Sbjct: 1235 NNFQFYTNKLNEMATRHVQLEAGLKQAISRNELSLVYQPKFCLRKGSLTGLEALLRWHHS 1294

Query: 416  VLGEFSNETLIHMAEQNGLIFEVGHFVLHQALKAASDWLAV-CPTFCIAINVSSVQLKNS 474
             LG  S    I +AE+ G+I ++GH+V++ A +  ++W  +      +A+N+S+ QLK +
Sbjct: 1295 ELGPISPAEFIPLAEETGIINQIGHWVINHACQQLAEWNELGFGDISMAVNLSARQLK-A 1353

Query: 475  GFVEQIRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYA 534
              +  I   L++   PA  LELE+TES ++ +   + +IL++L  LG+T+++DDFGTGY+
Sbjct: 1354 DIISTIEVALSVSGLPAKALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYS 1413

Query: 535  SFQYLKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQF 594
            S  YLK+FP D +KID+ F+  I +   D  I  +++ +A  L LNVV EG+E+ +Q  F
Sbjct: 1414 SLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNF 1473

Query: 595  ILEQGCDVGQGFLYGKPMPSE 615
            +  QGCD  QGFL  KP+ ++
Sbjct: 1474 LALQGCDQVQGFLLSKPLSAQ 1494