Pairwise Alignments

Query, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  462 bits (1189), Expect = e-134
 Identities = 243/611 (39%), Positives = 369/611 (60%), Gaps = 2/611 (0%)

Query: 9   IPIPSSMQANWQQMLNLLAEVLKVSATLIMRLRHHDLDVFCTSVGSDNPYQVGMTERLGT 68
           I +P  M  NWQQ L+LL+E++   A LIMR+   +++VF +S    NPY+    E LG 
Sbjct: 26  ITVPPEMLENWQQTLDLLSEIVDTPAALIMRVHPTEIEVFASSHSQGNPYKPHDKEHLGH 85

Query: 69  GLYCETVVNTRQILLVSNADLDPLWKDNPDLELGMRAYCGVPLQWPNGELFGSLCVTDRQ 128
           GLYCETV+   + L + NA  D  W  NPD++LGM AYCG+PL WP+   FG++C+ D +
Sbjct: 86  GLYCETVMKECRELHIPNALKDADWDKNPDIKLGMIAYCGLPLHWPDNSTFGTICMLDSK 145

Query: 129 ARQFLSTDQQLIKTFAESIEAQLKTLYQRETLLQMNQDLHFKVRHKMQSIASLNQSLHQE 188
            R +    + L+  F  +IE  L TL+Q+  L   NQ L  KV+ +   +A L+  L +E
Sbjct: 146 ERNYSQQFRSLLARFQNAIETNLITLFQQAKLQLHNQQLEQKVQQRTHELAELSAKLIRE 205

Query: 189 IDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEELAVIHIGFANARQLQ 248
           I+ R   E  +EY +S+D  TG  NR  L   LA  L ++   E+++V ++G  N + + 
Sbjct: 206 IETRTTTESSLEYHKSYDPLTGLPNRLNLINTLANMLEEINRKEKISVFYLGLRNFKSIN 265

Query: 249 ARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLCHRLIHA 308
              GY + D +L  L +RL   T+G    AR       L+    P   + ++L +++I+ 
Sbjct: 266 DSYGYLIGDKILTILSQRLQHCTDGHTFIARIAGAEFVLVQAHKPSQRETHKLLNQIINC 325

Query: 309 GQAQFVTEGLPVHLNPYIGVALS-RETRDPQQLLRHAVSSMLACKDSGYKVFFHSPALAD 367
             + F      + +   IG+A +  +  D   LL+ A ++M   K  G    F +     
Sbjct: 326 CNSPFGIADFVITIPSSIGIAQAPSDGIDAATLLQKAGAAMTISKAEGIPYSFFNQDTQI 385

Query: 368 NHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEFSNETLIH 427
             +++ QLE++L+ A+RNN+L L++QP + +KT + +GAEALLRW +PVLG+ + +  I 
Sbjct: 386 ALSQRYQLESHLVDALRNNELSLHYQPFIELKTHKVIGAEALLRWHNPVLGQVTPDRFIA 445

Query: 428 MAEQNGLIFEVGHFVLHQALKAASDWLAVCP-TFCIAINVSSVQLKNSGFVEQIRDLLAL 486
           +AE+NG I E+G+FVLH A+K A+DW  +    F IAIN+S VQ++N  F E I +LL L
Sbjct: 446 LAERNGQIMEIGNFVLHSAIKQAADWCRILQRDFKIAINISPVQMRNPRFAEHIAELLTL 505

Query: 487 YCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQYLKKFPFDG 546
           Y  PA  LELEITE  L+ DE  A + + +L  LG+ +SLDDFGTGY+S  YL+K+ FD 
Sbjct: 506 YQLPATALELEITEGMLLQDEHLAHNAIQQLQELGIRISLDDFGTGYSSLSYLQKYSFDT 565

Query: 547 IKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQGCDVGQGF 606
           +KID+ F+ ++E+SE D+E+ ++++ + KKL L V+ EG+E+T Q+ FI  + CD+GQG+
Sbjct: 566 LKIDRCFISKLENSEQDRELTKAIIAIGKKLKLKVIAEGVENTHQDSFIRSEECDLGQGY 625

Query: 607 LYGKPMPSEVF 617
           LYGKPM    F
Sbjct: 626 LYGKPMTPAQF 636