Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (466), Expect = 2e-51
 Identities = 95/221 (42%), Positives = 147/221 (66%), Gaps = 3/221 (1%)

Query: 6   ISAQSLSKLVSTNQEH-LTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEG 64
           I+ Q+L+K+ +   +  +  +K ++L+I  GE VAI+G SG+GK+TL+ ++ G+D+PS G
Sbjct: 3   IAIQALTKIYNPESDFPVAAVKSLDLTIAQGEFVAIMGPSGSGKTTLLNMIGGIDSPSSG 62

Query: 65  EVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKG--EAEDRE 122
            V++ G+ ++ L ++A  A R + VGF+FQ + L+P L+ALENV     L+G  EAE R+
Sbjct: 63  AVFIDGEDITHLSEQALIAFRRDHVGFIFQDYSLLPVLTALENVEFVMQLQGHSEAECRD 122

Query: 123 RAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKV 182
           RA  LL  VGL  +    PA+LSGG+QQRVA+ARA    P+ + ADEPT NLD ++ A++
Sbjct: 123 RAMALLAQVGLAAQQDKIPAKLSGGQQQRVAVARALAPRPRFVMADEPTANLDAKSTAEL 182

Query: 183 IDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGELEE 223
           +D++  LN + GTT +  THDP++  R +R    + G L E
Sbjct: 183 LDIMQSLNEQEGTTFIFSTHDPRVIARAKRVIVFEDGRLVE 223