Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  195 bits (495), Expect = 7e-55
 Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 2/219 (0%)

Query: 5   IISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEG 64
           ++   ++SK          +L  VNLSI  GE VAI+G+SG+GKSTL+ ++  LD PS G
Sbjct: 9   LLQVSNVSKRYHEGSIDTQVLSGVNLSIAKGEQVAIIGSSGSGKSTLLHIMGTLDKPSSG 68

Query: 65  EVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLL--KGEAEDRE 122
           +V   G+ L QL    +AA+R++ +GF++Q   L+P  +ALENV +P L+  +   E  +
Sbjct: 69  QVMFDGEDLYQLSPSRQAAIRNQELGFIYQFHHLLPEFTALENVAMPGLIQKRPRQEVEQ 128

Query: 123 RAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKV 182
            A++LL  VGL HR+HH+PA++SGGE+QR AIARA +  P+++ ADEPTGNLD  +   V
Sbjct: 129 EAKELLSRVGLGHRLHHTPAEMSGGERQRTAIARALINRPKLVLADEPTGNLDAASGDSV 188

Query: 183 IDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGEL 221
            +L+ EL  + GT  V+VTHDPKLA R  R+  MQ G+L
Sbjct: 189 YELIRELGSQLGTAFVVVTHDPKLAARMDRQLKMQDGQL 227