Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  187 bits (474), Expect = 2e-52
 Identities = 101/222 (45%), Positives = 150/222 (67%), Gaps = 3/222 (1%)

Query: 4   SIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSE 63
           ++I A+++ K     +    +LK VNL I+ GE V I+G SG GKSTLM +L  LD PS+
Sbjct: 2   TLIEAKNVIKTYGVGEAKSNVLKGVNLKIEEGEFVMIMGPSGCGKSTLMNVLGLLDVPSK 61

Query: 64  GEVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGEAED--R 121
           G+VY+ GK  +++++  RA  R +  GF+FQ F LI +L+AL NV LP  L G+ E   +
Sbjct: 62  GDVYIKGKKTTKMNENERAVFRRKISGFIFQQFHLIGTLTALGNVELPMTLDGKEETFRQ 121

Query: 122 ERAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAK 181
           +RA++LL  VGL  R ++ P+QLSGG+QQRVAIAR+   +P++LFADEPTGNLD ++  +
Sbjct: 122 KRAKELLNIVGLSERENYKPSQLSGGQQQRVAIARSLSNNPKLLFADEPTGNLDSKSGKQ 181

Query: 182 VIDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGELEE 223
           V+++L  L+ E G T+V+VTHD  + +   +   M+ GE+ E
Sbjct: 182 VMEILENLHNE-GMTIVMVTHDSYMIKYATKVIRMKDGEILE 222