Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  187 bits (475), Expect = 1e-52
 Identities = 99/215 (46%), Positives = 147/215 (68%), Gaps = 4/215 (1%)

Query: 5   IISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEG 64
           +I+  SLSK+  T++     L+ VNL++  GE ++I+G SG GKSTL+ ++  LD P+ G
Sbjct: 1   MITLTSLSKIYRTDEIETVALENVNLTVDRGEFLSIMGPSGCGKSTLLNIMGLLDAPTTG 60

Query: 65  EVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLK--GEAEDRE 122
            V + G     + D+  AA R++++GFVFQSF LI SL+ ++NV LP L +  G  E + 
Sbjct: 61  TVEINGTHTEGMKDKQLAAFRNKTLGFVFQSFHLINSLNVMDNVELPLLYRRIGSGERKR 120

Query: 123 RAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQETAAKV 182
            A+++L+ VGL HRM+H P QLSGG+ QRV IARA +  P+++ ADEPTGNLD +  A+V
Sbjct: 121 LAKEVLEKVGLSHRMNHFPTQLSGGQCQRVTIARAIIGHPEIILADEPTGNLDSKMGAEV 180

Query: 183 IDLLFELNREHGTTLVLVTHDPKLAQRCQR--RFF 215
           ++LL  LN+E G T+V+VTH+ + A++  R  RFF
Sbjct: 181 MELLHRLNKEDGRTIVMVTHNEEQAKQTSRTIRFF 215