Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  184 bits (467), Expect = 4e-51
 Identities = 99/214 (46%), Positives = 139/214 (64%), Gaps = 3/214 (1%)

Query: 1   MQTSIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDT 60
           M   ++   +  +     ++ LT+LK +NLSI  GE VAIVGASG+GKSTLM +L  LD 
Sbjct: 1   MSKPLLEVSACYRSFQAGEQQLTVLKDINLSIARGEMVAIVGASGSGKSTLMNILGCLDK 60

Query: 61  PSEGEVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGE--A 118
           PS+G  ++ G+  SQ+D +  A LR E  GF+FQ + L+  L+A+ NV +P +  G+   
Sbjct: 61  PSKGSYFIDGQDTSQMDVDELAKLRREHFGFIFQRYHLLGDLNAVGNVEVPAVYAGKDRL 120

Query: 119 EDRERAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQET 178
           E RERA+ LL  +GL  R+ H P QLSGG+QQRV++ARA M    V+ ADEPTG LD  +
Sbjct: 121 ERRERAESLLSRLGLGERLDHKPNQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHS 180

Query: 179 AAKVIDLLFELNREHGTTLVLVTHDPKLAQRCQR 212
             +++ LL EL+RE G T+++VTHD  +AQ   R
Sbjct: 181 GEEMMRLLQELHRE-GQTIIIVTHDMHVAQHADR 213