Pairwise Alignments

Query, 225 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., lipoprotein releasing system, ATP-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  194 bits (493), Expect = 1e-54
 Identities = 102/224 (45%), Positives = 148/224 (66%), Gaps = 2/224 (0%)

Query: 1   MQTSIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDT 60
           MQ  ++  Q++SK          +L +V+L +  GE +AIVG SG+GKSTL+ ++  LD 
Sbjct: 23  MQDVLLQVQAVSKSYHDGDVTTQVLSEVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDK 82

Query: 61  PSEGEVYLLGKPLSQLDDEARAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGE--A 118
           PS G+V L G+ L Q+    +A +R++ +GF++Q   L+P  SALENV +P  ++G   A
Sbjct: 83  PSAGKVLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFSALENVAMPAFIQGRDRA 142

Query: 119 EDRERAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMISPQVLFADEPTGNLDQET 178
           + +  A+ LL+ VGL HRM H PA+LSGGE+QRVAIARA +  P+++ ADEPTGNLD ++
Sbjct: 143 QAQADAKVLLERVGLGHRMSHIPAELSGGERQRVAIARALINKPKLVLADEPTGNLDAKS 202

Query: 179 AAKVIDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGELE 222
              V +L+ EL  + GT  V+VTHDPKLA R  R+  M+ G L+
Sbjct: 203 GEAVYELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNGYLQ 246