Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 834 a.a., Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component from Pseudomonas stutzeri RCH2

 Score =  357 bits (915), Expect = e-102
 Identities = 243/814 (29%), Positives = 412/814 (50%), Gaps = 33/814 (4%)

Query: 1   MKALPPASLNRRLLRWSLSEIRHGQLWPVTVALTLIIASIFALTALAQRMEQVIVKQGRD 60
           M  +P A L     R  L + R G+L  +  AL + +A+  A+     R+   ++ +  +
Sbjct: 1   MMRMPKARLLALAYRQLLRDARAGELRVLFFALVVAVAASTAIGYFGARLNDAMLLRASE 60

Query: 61  ALTADTVFVSGNPLPESLLTLTAQQASQTSQMTRFATMAFSDQGMQLVTVKAVDSAYPLR 120
            L AD V     P     +    Q     +Q+  F+++  ++Q +QL +VKA  S+YPLR
Sbjct: 61  FLGADMVLSGSAPASPEQIEAGKQLDLDHAQVVEFSSVIATEQDLQLASVKAASSSYPLR 120

Query: 121 GEMRLS----DGQQTFNHVASNQLWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPG 176
           G +R +    + +Q     A  + W E R+   L + IGD++ +G     ++  +  EP 
Sbjct: 121 GTLRSAAQPYEAEQPGQGPAPGEAWAEARLFAALELQIGDSIEVGSKLLRLTRVLTYEPD 180

Query: 177 LSFNPFQQMPSVYIHASDVDKTGAIQPGSRVQFSLFMTGDDSAIESIKQ--QVSLTASDR 234
              + +   P V +H  D++ TG +QPGSRV++     G+ + + + +Q  Q  L A  R
Sbjct: 181 RVGDFYSLTPRVLMHLDDLEATGVVQPGSRVRYRELWRGETATLAAYQQSIQAGLQAHQR 240

Query: 235 WRD-QESGSRTNEVFERTQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGA 293
                +S  +      R ++YL+L     IL+A   + L+   + + R    A+L+ LG 
Sbjct: 241 IETANDSNRQIGGALGRAERYLNLASLAAILLAGVAVALSAARFATRRFDASALLRCLGL 300

Query: 294 SRRWLRRWLALQVGLLLVFAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALA 353
           SR        LQ+ +L V A + G+++G   +  L   L+DLL   +P  G+ P    +A
Sbjct: 301 SRNDALLLYTLQLAMLGVLASLAGALLGWAAQHGLFFLLRDLLAQEIPPGGVWPAAAGIA 360

Query: 354 SSFLIAVPALGIP----LGRLLSVSAVAVMQPVTAQTRWQRNLLLIMVPIVPLLLVYWQN 409
           +  L+A+    +P    LGR+  +  +         + W    L+    I  L L+ W+ 
Sbjct: 361 TG-LVALAGFALPPLAALGRVPPLRVLRRDMLPVPPSAW----LVYGTAIFALGLIMWRL 415

Query: 410 QL---IWIVLIGIVVLFAMLAVVSVLV-----TRLLAKLPLNPAMALALSRINRSGAASG 461
            L   I + L+G  +L  +L    +L+      RLLA   L+    L L ++ R   A+ 
Sbjct: 416 SLDLKITLALLGGGLLATLLLGGLLLLGLKGMRRLLAGASLS--WRLGLGQLLRHPLAAA 473

Query: 462 LQFGALALSLMLLAIIWLVRTDLLSDWQRTLPENAPNAFALNISESEKASYLAALDTASI 521
            Q  A  L L+ +A+I L+R +LL  WQ  LP+NAPN F LN+  +EK ++   +   S 
Sbjct: 474 GQALAFGLILLAMALIALLRGELLDTWQDQLPDNAPNHFVLNVLPAEKDAFAERIAALSN 533

Query: 522 ERSAAYPIMRGRLTHINGQEAKQYAQNGEESSDALRRELNLTWAEQLPDYNPILQGEWQS 581
             ++ YP++ GRL  IN +  +Q      +   A+RR+L+LTWA  LP  N ++ G+W +
Sbjct: 534 HAASLYPVVPGRLISINDEPVRQLVSKESQGERAIRRDLSLTWAADLPKDNHLVAGQWWT 593

Query: 582 QN------GVSVEQEVASDLGLKLGDTLTFMINSQTVSAQVNTIRQVEWREMKPNFYFIF 635
           +       GVSVE E+A  L LKLGD L+F I   T  A V ++R+V W   +PNFY IF
Sbjct: 594 ERKATDLPGVSVEAELAESLQLKLGDRLSFTIGGLTREASVTSLREVNWDSFQPNFYMIF 653

Query: 636 SPDVVQNLPVSYLISFRIQPEHDALLGQLSRQHPTVSLMDIRTMGAKIQALLTQIVWSVT 695
            PD ++ +P +Y+ SF + P  +  L +L+R  P+V+L+ +  + A+++++L Q+  +V 
Sbjct: 654 EPDTLEGMPATYMTSFHLPPGKERELVELARAFPSVTLLQVEALLAQLRSILAQVSLAVE 713

Query: 696 VLAALGVLAGVLLIFTLLRLSLSQRQQEIRLYRTLGASRRRVMHTIWAEYGVMALVGGLV 755
            +    + AG+ ++F  L+ +L +R ++  L R LGA RR ++    AE+G++    GL+
Sbjct: 714 YVLLFVLAAGLAVLFAGLQATLDERIRQGALLRALGAERRLLLRARRAEFGLLGAASGLL 773

Query: 756 ASVSADAVVAAVMKWGFSLTPSLHMALWFVLPAL 789
           A++  + V A +  + F L    H  L  VLP +
Sbjct: 774 AALGCELVSALLYHYAFDLRWQPHPWL-LVLPLI 806